Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AC135628.1-201ENST00000568867 534 ntBASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.25□□□□□ -2.05
CTSFQ9UBX1 MTND1P8-201ENST00000571424 950 ntBASIC2.25□□□□□ -2.05
CTSFQ9UBX1 RPS3AP23-202ENST00000574601 686 ntBASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AC022662.1-201ENST00000580252 331 ntBASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.25□□□□□ -2.05
CTSFQ9UBX1 HMGN2P15-201ENST00000585707 270 ntBASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AC245884.10-201ENST00000597355 337 ntBASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AL645944.1-201ENST00000603857 493 ntBASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AL158042.1-201ENST00000605338 460 ntBASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AL139418.1-201ENST00000613613 177 ntBASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.25□□□□□ -2.05
CTSFQ9UBX1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AL136981.2-201ENST00000617319 734 ntBASIC2.25□□□□□ -2.05
CTSFQ9UBX1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CTSFQ9UBX1 AL159972.1-201ENST00000625150 448 ntBASIC2.25□□□□□ -2.05
CTSFQ9UBX1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
CTSFQ9UBX1 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CTSFQ9UBX1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.25□□□□□ -2.05
CTSFQ9UBX1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 DDX43P2-201ENST00000604753 1354 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 MTCO1P9-201ENST00000505577 1534 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AL161781.1-201ENST00000354277 403 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 RNU6-83P-201ENST00000384568 112 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 U3.37-201ENST00000408528 213 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 SSR1P2-201ENST00000415208 787 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 MTND1P23-201ENST00000416931 372 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 RSU1P2-202ENST00000437884 485 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 MTND3P1-201ENST00000441336 220 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 IPO7P1-201ENST00000442031 636 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 MRPS17P3-201ENST00000465453 385 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 RPL7P18-201ENST00000478965 734 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AC022447.3-201ENST00000506865 495 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AP002770.2-201ENST00000543613 532 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AC009712.1-201ENST00000564938 316 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 MIR3945-201ENST00000581853 98 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AC090186.1-201ENST00000605991 572 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AC013470.4-201ENST00000619978 986 ntBASIC2.24□□□□□ -2.05
CTSFQ9UBX1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.24□□□□□ -2.05
CTSFQ9UBX1 AC080128.1-201ENST00000474389 1917 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CTSFQ9UBX1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CTSFQ9UBX1 RNU6-433P-201ENST00000363216 104 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 RNU6-1078P-201ENST00000364522 103 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 SNORA41-201ENST00000384675 132 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 USP9YP27-201ENST00000418455 438 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CTSFQ9UBX1 PGBD4P3-201ENST00000440731 581 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 OSTCP8-201ENST00000445117 448 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 CBWD4P-201ENST00000445695 655 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 AP000542.1-201ENST00000448473 371 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 USP9YP10-201ENST00000454868 628 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 ATG12P2-201ENST00000456830 416 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 LINC00888-204ENST00000487386 421 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 AC105252.1-201ENST00000503089 286 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 AC023141.11-201ENST00000508864 202 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.23□□□□□ -2.05
CTSFQ9UBX1 AC024589.1-201ENST00000512207 263 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 RNA5SP281-201ENST00000516504 135 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.23□□□□□ -2.05
CTSFQ9UBX1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.23□□□□□ -2.05
CTSFQ9UBX1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.23□□□□□ -2.05
CTSFQ9UBX1 AGGF1P5-201ENST00000567900 919 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.23□□□□□ -2.05
CTSFQ9UBX1 AL596327.1-201ENST00000603629 213 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 AC112220.3-201ENST00000605502 502 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.23□□□□□ -2.05
CTSFQ9UBX1 AC099063.3-201ENST00000642066 185 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 AC007336.1-201ENST00000576365 3828 ntBASIC2.23□□□□□ -2.05
CTSFQ9UBX1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CTSFQ9UBX1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.22□□□□□ -2.05
CTSFQ9UBX1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CTSFQ9UBX1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CTSFQ9UBX1 SNORA23-201ENST00000365128 182 ntBASIC2.22□□□□□ -2.05
CTSFQ9UBX1 RNU6-637P-201ENST00000384050 107 ntBASIC2.22□□□□□ -2.05
CTSFQ9UBX1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.22□□□□□ -2.05
CTSFQ9UBX1 ZNF863P-201ENST00000426746 417 ntBASIC2.22□□□□□ -2.05
CTSFQ9UBX1 AC008850.1-201ENST00000427546 362 ntBASIC2.22□□□□□ -2.05
CTSFQ9UBX1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.22□□□□□ -2.05
CTSFQ9UBX1 DUXAP8-207ENST00000456786 622 ntBASIC2.22□□□□□ -2.05
CTSFQ9UBX1 AC093281.2-201ENST00000510153 597 ntBASIC2.22□□□□□ -2.05
CTSFQ9UBX1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms