Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 Y_RNA.169-201ENST00000363745 96 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 SNORD21-201ENST00000383953 95 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 RNU6-533P-201ENST00000384144 107 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 NDUFS5P1-201ENST00000405668 289 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 RNU6-920P-201ENST00000410926 92 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 RPLP0P7-201ENST00000416050 667 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 AC006366.1-201ENST00000422002 759 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 ELOCP14-201ENST00000428070 331 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.64□□□□□ -1.99
LHX3Q9UBR4 HMGB1P27-201ENST00000431429 603 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 AC010153.1-201ENST00000432862 727 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 RPL7P34-201ENST00000433316 712 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.64□□□□□ -1.99
LHX3Q9UBR4 ELOCP7-201ENST00000439968 331 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.64□□□□□ -1.99
LHX3Q9UBR4 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 MRPS17P3-201ENST00000465453 385 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
LHX3Q9UBR4 RPL23AP11-201ENST00000475260 469 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.64□□□□□ -1.99
LHX3Q9UBR4 AC005178.1-201ENST00000508392 440 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 MTND1P22-201ENST00000510572 951 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 RNA5SP76-201ENST00000516277 87 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 AC025881.1-201ENST00000518851 512 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 AC022616.6-201ENST00000520479 119 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 AC243972.3-201ENST00000539655 198 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 ZNF519P3-201ENST00000557158 1032 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 AC145350.1-201ENST00000567426 208 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.64□□□□□ -1.99
LHX3Q9UBR4 AC020895.1-201ENST00000595362 272 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 RPL23AP78-201ENST00000599928 470 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LHX3Q9UBR4 uc_338.12-201ENST00000616344 181 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 AC002064.3-201ENST00000623448 346 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 AC079416.3-201ENST00000624479 549 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.64□□□□□ -1.99
LHX3Q9UBR4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
LHX3Q9UBR4 MTND5P7-201ENST00000413558 1798 ntBASIC2.64□□□□□ -1.99
LHX3Q9UBR4 MTND5P29-201ENST00000458676 1807 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 SNORD62.1-201ENST00000362541 86 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 RNU5F-7P-201ENST00000363696 115 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 RNU6-884P-201ENST00000363889 107 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 MIR196B-201ENST00000384852 84 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 SNORD115.1-201ENST00000391109 76 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 RN7SKP123-201ENST00000410732 291 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 RNU4-72P-201ENST00000410754 173 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 RNU6-193P-201ENST00000410977 107 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 ZNF90P2-204ENST00000419323 1075 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 MTND1P28-201ENST00000435623 950 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 SNRPEP9-201ENST00000436794 238 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AC011816.1-201ENST00000441346 546 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 EPS15P1-201ENST00000448836 336 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 RPS3P1-201ENST00000456781 192 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 RPL26P9-201ENST00000457466 433 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AC010486.2-201ENST00000505572 483 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AC114786.4-201ENST00000508771 728 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 RNU4-29P-201ENST00000515943 174 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 DUXAP5-201ENST00000529668 529 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 MTND3P12-201ENST00000559068 328 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 HMGN2P15-201ENST00000585707 270 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 NIFKP6-201ENST00000598115 845 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AC098826.3-201ENST00000603823 466 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 MTND4LP5-201ENST00000605152 292 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AC004805.2-201ENST00000605382 482 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AC105129.3-201ENST00000605455 485 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AC122133.1-201ENST00000613964 233 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 UCA1.1-201ENST00000620952 75 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 MIR6852-201ENST00000621699 66 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AF246928.1-201ENST00000623768 87 ntBASIC2.63□□□□□ -1.99
LHX3Q9UBR4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
LHX3Q9UBR4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.62□□□□□ -1.99
LHX3Q9UBR4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LHX3Q9UBR4 AC092104.1-201ENST00000497346 1441 ntBASIC2.62□□□□□ -1.99
LHX3Q9UBR4 ZNF519P1-201ENST00000449011 1626 ntBASIC2.62□□□□□ -1.99
LHX3Q9UBR4 RNU6-553P-201ENST00000364047 96 ntBASIC2.62□□□□□ -1.99
LHX3Q9UBR4 RPS4XP8-201ENST00000402039 771 ntBASIC2.62□□□□□ -1.99
LHX3Q9UBR4 AL139397.2-201ENST00000404529 772 ntBASIC2.62□□□□□ -1.99
LHX3Q9UBR4 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.62□□□□□ -1.99
LHX3Q9UBR4 USP9YP20-201ENST00000419224 558 ntBASIC2.62□□□□□ -1.99
LHX3Q9UBR4 Z99497.1-201ENST00000421282 135 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms