Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 Y_RNA.9-201ENST00000362354 101 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 RNU6-1287P-201ENST00000362914 107 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 RNU6-996P-201ENST00000365438 107 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 RNU6-1060P-201ENST00000384664 107 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 Y_RNA.554-201ENST00000384672 102 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 MIR483-201ENST00000385070 76 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 MIR199A2-201ENST00000385289 110 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 RNU6-780P-201ENST00000391030 104 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 UBE2V1P2-201ENST00000397758 440 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AL591416.1-201ENST00000404015 867 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 MTND1P23-201ENST00000416931 372 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC068533.1-201ENST00000418542 415 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 AL714022.1-201ENST00000439897 151 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC104058.1-201ENST00000448028 297 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 HMGB3P8-201ENST00000449709 577 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AL118520.1-201ENST00000450770 291 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 snoU13.28-201ENST00000459235 104 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 RPL21P8-201ENST00000465083 535 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC110768.1-201ENST00000509222 400 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 SCARNA14-201ENST00000516903 136 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 PSMA2P1-201ENST00000526365 646 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AK6P1-201ENST00000540219 478 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 AL157687.1-201ENST00000554853 619 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AL391261.3-201ENST00000557194 520 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AL157871.3-201ENST00000557231 293 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC025678.1-201ENST00000567861 338 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 AL138889.2-201ENST00000603883 242 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC093788.1-201ENST00000609356 927 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC019176.2-201ENST00000611579 315 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC009093.8-201ENST00000641769 292 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 ZNF285B-201ENST00000561698 1767 ntBASIC3.52□□□□□ -1.85
LRFN1Q9P244 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN1Q9P244 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.52□□□□□ -1.85
LRFN1Q9P244 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN1Q9P244 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LRFN1Q9P244 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN1Q9P244 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN1Q9P244 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN1Q9P244 RNU6-778P-201ENST00000363269 103 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 Y_RNA.381-201ENST00000365666 102 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 RNU6-198P-201ENST00000384258 104 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 U8.11-201ENST00000384699 133 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 U8.12-201ENST00000384701 133 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 CIR1P3-201ENST00000405137 479 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 Z98941.1-201ENST00000407764 100 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 EEF1A1P40-201ENST00000412883 573 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 AL159169.1-201ENST00000421119 127 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AL158156.1-201ENST00000422509 473 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC091286.1-201ENST00000431233 461 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 RPS3AP12-201ENST00000443616 753 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 Z99127.3-201ENST00000448158 395 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC073415.1-201ENST00000449240 153 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 CACYBPP2-201ENST00000453625 678 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 U8.18-201ENST00000459285 133 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AL133162.1-201ENST00000463228 453 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC233702.1-201ENST00000482905 502 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AL163973.1-201ENST00000484753 577 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC010342.1-201ENST00000514047 877 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 RNU1-95P-201ENST00000516357 160 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 RNU1-128P-201ENST00000516704 160 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.51□□□□□ -1.85
LRFN1Q9P244 BNIP3P30-201ENST00000601184 574 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AL355598.1-201ENST00000604169 202 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AC007179.3-201ENST00000604976 235 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LRFN1Q9P244 MIR8058-201ENST00000615737 89 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AL357559.1-201ENST00000622228 274 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 AL034408.1-202ENST00000636088 415 ntBASIC3.51□□□□□ -1.85
LRFN1Q9P244 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms