Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC027514.1-201ENST00000588561 1603 ntBASIC3.32□□□□□ -1.88
HCN3Q9P1Z3 AC118273.1-201ENST00000525324 3006 ntBASIC3.32□□□□□ -1.88
HCN3Q9P1Z3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HCN3Q9P1Z3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 OR4G2P-201ENST00000328113 903 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 FTLP6-201ENST00000355274 422 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 RNA5SP119-201ENST00000362715 117 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 MIR490-201ENST00000384865 128 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 PTMAP5-201ENST00000393073 333 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AL591416.1-201ENST00000404015 867 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AF274854.1-201ENST00000413236 615 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AL353193.1-201ENST00000421444 268 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AC006989.1-201ENST00000427212 131 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 ARF4P2-201ENST00000430209 526 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 CYCSP35-201ENST00000451978 304 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 PRSS3P4-201ENST00000453323 162 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AC027673.1-201ENST00000456245 405 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 RN7SL293P-201ENST00000481765 281 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AC104806.1-201ENST00000508720 308 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 PCBP2P3-201ENST00000509726 843 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 SNORA31.1-201ENST00000515993 133 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 SNORA31.5-201ENST00000516190 133 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 SNORD27.1-201ENST00000516319 72 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 SCARNA13-201ENST00000516672 275 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 RNA5SP165-201ENST00000517142 115 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 RANP3-201ENST00000530970 276 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AC007458.1-201ENST00000542812 373 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AL163153.1-201ENST00000554223 283 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 HMGB1P14-201ENST00000557424 591 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 MIR4738-201ENST00000579134 87 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 DEFB131E-202ENST00000602581 683 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AF250324.2-201ENST00000608299 610 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 AC013562.2-201ENST00000611632 603 ntBASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCN3Q9P1Z3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 AC091152.2-201ENST00000591628 2569 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 RNA5SP50-201ENST00000363731 107 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 RNU6-217P-201ENST00000384164 104 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 RNA5SP252-201ENST00000391131 119 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 CISD1P1-201ENST00000393907 327 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 CALM2P3-201ENST00000400429 449 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 OR51A5P-201ENST00000415429 942 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 AC017079.2-201ENST00000416102 485 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 RPL23AP82-202ENST00000427528 469 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 SNRPEP9-201ENST00000436794 238 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 RPL23AP20-201ENST00000447965 421 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 RN7SL330P-201ENST00000469709 307 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 RNU2-27P-201ENST00000516185 142 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 RNU6-914P-201ENST00000516749 109 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 RNA5SP503-201ENST00000517047 117 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 AP001893.2-201ENST00000526949 202 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 AC006504.3-201ENST00000586818 523 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 MIR15A-201ENST00000607334 83 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 AC084757.4-201ENST00000616350 526 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
HCN3Q9P1Z3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.29□□□□□ -1.88
HCN3Q9P1Z3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms