Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ELOCP7-201ENST00000439968 331 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 HMGN1P5-201ENST00000448591 263 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 HMGB1P36-201ENST00000487709 576 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 MTND5P13-201ENST00000513046 1079 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC114781.4-201ENST00000513707 639 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 RNU1-103P-201ENST00000516502 125 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 CYCSP26-201ENST00000534107 320 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC005832.3-201ENST00000537929 631 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC106782.4-201ENST00000568264 210 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 MIR3162-201ENST00000581818 82 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 MIR4765-201ENST00000585007 77 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC004987.4-201ENST00000603383 338 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 RPP40P2-201ENST00000603596 712 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AL158211.2-201ENST00000607282 395 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC069294.1-201ENST00000608397 350 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AL161423.1-201ENST00000613700 262 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AL158163.2-201ENST00000619110 700 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AP000943.4-201ENST00000622912 357 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC007490.1-201ENST00000624321 703 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 U2.21-201ENST00000637295 81 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 RNU6-223P-201ENST00000362830 107 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 AL139156.1-201ENST00000412785 841 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 Z98742.2-201ENST00000431564 187 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 MTND1P28-201ENST00000435623 950 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 PSPHP1-201ENST00000450062 261 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 AC104563.1-201ENST00000476147 376 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 AC008413.1-201ENST00000511864 177 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 MIR892C-201ENST00000516410 77 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 DEFB131D-201ENST00000526803 184 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 AP003168.1-201ENST00000530091 307 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 MIR3167-201ENST00000579623 85 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 PISRT1-201ENST00000626175 531 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 ADAM3A-203ENST00000461344 2157 ntBASIC1.93□□□□□ -2.1
VAPAQ9P0L0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
VAPAQ9P0L0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 RNU6-289P-201ENST00000364093 107 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 RNU1-91P-201ENST00000364746 163 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 RNU6-744P-201ENST00000365557 107 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 RNU6-1316P-201ENST00000384242 108 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 MIR17-201ENST00000385012 84 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 SNORA40.2-201ENST00000390847 128 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 SNORA11.4-201ENST00000408823 129 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 BX276092.3-201ENST00000424182 230 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AC027124.2-201ENST00000428249 105 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 FABP5P14-201ENST00000437273 393 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 MTCO3P45-201ENST00000443036 613 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 RNA5SP165-201ENST00000517142 115 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 OR5AQ1P-201ENST00000527596 927 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 CBX3P7-201ENST00000532876 502 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AC009097.3-201ENST00000563557 1018 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AC105245.1-201ENST00000581934 244 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AC008749.1-201ENST00000597650 306 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AC107214.2-201ENST00000608204 634 ntBASIC1.92□□□□□ -2.1
VAPAQ9P0L0 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
VAPAQ9P0L0 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 MTND5P30-201ENST00000452896 1731 ntBASIC1.91□□□□□ -2.1
VAPAQ9P0L0 MTND5P29-201ENST00000458676 1807 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms