Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC034105.3-201ENST00000565294 442 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC055876.1-202ENST00000567053 138 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 GLUD1P4-201ENST00000590914 418 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 BDH2P1-201ENST00000602288 736 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 RMST_3.1-201ENST00000611651 109 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC104260.1-201ENST00000616660 539 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 MIR3662-201ENST00000637030 95 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 MIR7153-201ENST00000637758 57 ntBASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NCKIPSDQ9NZQ3 AL354685.2-201ENST00000448218 1447 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 MTND4P12-201ENST00000498999 1377 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AL133383.2-201ENST00000622958 2336 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 Y_RNA.61-201ENST00000362835 102 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-511P-201ENST00000363496 107 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-1322P-201ENST00000364309 107 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 RNU6-876P-201ENST00000391295 104 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 OR51A5P-201ENST00000415429 942 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AC097713.2-201ENST00000430199 356 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 MTND1P11-201ENST00000456661 876 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AC083798.1-201ENST00000472671 131 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 MTCYBP18-201ENST00000501056 747 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 SNORA40.12-201ENST00000516329 111 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 RPL21P12-201ENST00000559810 515 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 Z84480.1-201ENST00000605131 311 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AC022149.2-201ENST00000621061 203 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AP003122.6-201ENST00000623831 495 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 FER-210ENST00000628534 558 ntTSL 5 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 AC119674.1-207ENST00000641355 633 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 ZNF680P1-201ENST00000436625 1469 ntBASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
NCKIPSDQ9NZQ3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU6-1120P-201ENST00000362988 108 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 RNY3P3-201ENST00000363816 102 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU1-33P-201ENST00000364249 162 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 Y_RNA.367-201ENST00000365544 101 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU6-877P-201ENST00000383868 107 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC110754.1-201ENST00000399740 601 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU6-55P-201ENST00000411092 107 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU6-954P-201ENST00000411355 107 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC018630.2-202ENST00000422992 927 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC137499.1-201ENST00000427602 88 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC005094.1-201ENST00000440420 368 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 CACYBPP2-201ENST00000453625 678 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC006539.3-201ENST00000454258 129 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 HMGN2P16-201ENST00000456802 261 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 HMGB3P15-201ENST00000507326 574 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 RPL23AP84-201ENST00000571193 464 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 MIR3921-201ENST00000577308 85 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AL162413.1-201ENST00000603198 110 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms