Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC093801.2-201ENST00000503966 1050 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC098862.1-201ENST00000504991 413 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC027338.1-201ENST00000514840 825 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 SNORA31.3-201ENST00000516029 96 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6-1183P-201ENST00000517054 60 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 RN7SKP258-201ENST00000517151 304 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 EEF1A1P37-201ENST00000522748 715 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 RANP3-201ENST00000530970 276 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC008269.2-201ENST00000561915 1105 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 MIR3198-2-201ENST00000577868 80 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 MIR5007-201ENST00000583098 95 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 VN1R87P-201ENST00000596706 487 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 BBIP1P1-201ENST00000602999 279 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 DPPA3P3-201ENST00000603842 430 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC016925.2-201ENST00000605108 242 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC018638.7-201ENST00000605836 1114 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC092953.2-201ENST00000608000 699 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 FAM25E-202ENST00000608562 189 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 MIR6875-201ENST00000617506 72 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC012150.2-201ENST00000621300 544 ntBASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC42SE1Q9NRR8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC092447.10-201ENST00000620607 1652 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6-432P-201ENST00000384196 109 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6-1122P-201ENST00000384449 107 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AL021407.1-201ENST00000404531 386 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 RN7SKP278-201ENST00000410504 342 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC078974.1-201ENST00000411597 223 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC074117.2-201ENST00000417130 397 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 EIF4EP2-201ENST00000422816 654 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 GTF2IP3-201ENST00000433887 494 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 RPS15AP9-201ENST00000439856 381 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC114755.5-201ENST00000447760 831 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AL118520.1-201ENST00000450770 291 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 HSPE1P24-201ENST00000450782 238 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC112771.1-201ENST00000463581 102 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 FO393415.2-201ENST00000480085 343 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 SLC25A15P5-201ENST00000508033 253 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 FAM206BP-201ENST00000510179 541 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 RNA5SP200-201ENST00000516360 103 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6-362P-201ENST00000516736 90 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 ACA59.2-201ENST00000517061 156 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 CYCSP27-201ENST00000527643 293 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 OR5B19P-201ENST00000531766 928 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 CYB5AP5-201ENST00000549779 389 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 ARL2BPP2-201ENST00000550907 489 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 MIR4277-201ENST00000578298 84 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC006539.2-201ENST00000601729 572 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC068790.3-201ENST00000602988 553 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 ELOCP35-201ENST00000604289 336 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 PRR13P7-201ENST00000605538 430 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 TP73-AS1.1-201ENST00000611447 161 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 AL079343.1-201ENST00000572358 1771 ntBASIC0.95□□□□□ -2.26
CDC42SE1Q9NRR8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 AL589826.1-201ENST00000340697 249 ntBASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 RNU6-512P-201ENST00000364438 103 ntBASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 SNORA16.1-201ENST00000364597 132 ntBASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 RNA5SP505-201ENST00000364748 108 ntBASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 SNORD48-201ENST00000364953 64 ntBASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 MIR150-201ENST00000385048 84 ntBASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 BTF3L4P2-201ENST00000392798 346 ntBASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 AL356057.3-201ENST00000402607 340 ntBASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.94□□□□□ -2.26
CDC42SE1Q9NRR8 AC009310.1-201ENST00000414414 451 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms