Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PRDM9Q9NQV7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRDM9Q9NQV7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRDM9Q9NQV7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
PRDM9Q9NQV7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PRDM9Q9NQV7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
PRDM9Q9NQV7 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.28□□□□□ -1.56
PRDM9Q9NQV7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 AC073136.1-201ENST00000449426 2884 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 Y_RNA.172-201ENST00000363765 102 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 RNA5SP242-201ENST00000364171 118 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 RNU6-173P-201ENST00000364215 104 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 RNU6-1074P-201ENST00000383995 104 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 RNU6-476P-201ENST00000384726 107 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 RNU6-578P-201ENST00000390980 103 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 RN7SKP206-201ENST00000410823 293 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 RPL23AP95-201ENST00000426806 265 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 AZGP1P2-201ENST00000454506 345 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 AC022616.8-201ENST00000533569 253 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 AL121603.1-201ENST00000553815 142 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 MRPS21P7-201ENST00000566937 238 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 MIR3145-201ENST00000580727 82 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 MIR1273E-201ENST00000581165 102 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 MIR4744-201ENST00000581563 82 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 MIR7853-201ENST00000584820 132 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 AC025574.2-201ENST00000615621 514 ntBASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PRDM9Q9NQV7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 DEFB108F-201ENST00000344638 222 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 RNA5SP326-201ENST00000363209 110 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 RNU6-527P-201ENST00000363425 104 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 RNU6-429P-201ENST00000384582 108 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 MIR143-201ENST00000385300 106 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 RNA5SP44-201ENST00000410446 133 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 CHEK2P5-201ENST00000423877 246 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AL358075.3-201ENST00000426289 226 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 HMGN2P27-201ENST00000427352 270 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AL589765.3-201ENST00000446084 462 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AL136038.1-201ENST00000497246 351 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 RN7SL466P-201ENST00000497546 295 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AC020593.1-201ENST00000507399 299 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 Y_RNA.709-201ENST00000516952 92 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AC133555.2-201ENST00000550213 292 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 SNORD95-201ENST00000579879 68 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AC024153.1-201ENST00000603103 365 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AC099669.2-201ENST00000616549 437 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 AC092628.2-201ENST00000622492 339 ntBASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRDM9Q9NQV7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms