Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 RNU6-741P-201ENST00000383889 107 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AL451074.5-201ENST00000415894 435 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AL589872.1-201ENST00000426602 288 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AC007919.1-201ENST00000429380 217 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 Z82210.1-201ENST00000440037 231 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 SNRPGP6-201ENST00000451124 220 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 MTND1P12-201ENST00000455231 147 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 SNRPGP9-201ENST00000456025 225 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 KC877373.1-201ENST00000479066 408 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AC117522.3-201ENST00000507974 584 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 OR5BM1P-201ENST00000512021 366 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 MTND5P13-201ENST00000513046 1079 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 SNORA31.3-201ENST00000516029 96 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AC138761.3-201ENST00000579993 334 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AC006504.3-201ENST00000586818 523 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 AL359198.2-201ENST00000611836 194 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 MIR6733-201ENST00000635723 61 ntBASIC2.98□□□□□ -1.93
SNX25Q9H3E2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SNX25Q9H3E2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 SNORA5B-201ENST00000363786 132 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 RNU6-14P-201ENST00000384630 106 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 MIR181A2-201ENST00000384863 110 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 RNU1-101P-201ENST00000391171 127 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 RNU2-62P-201ENST00000410868 191 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AL592148.1-201ENST00000413568 445 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 HSPE1P1-201ENST00000421494 318 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AC129850.1-201ENST00000436203 508 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AL513043.1-201ENST00000439124 535 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 PIGFP3-201ENST00000441918 722 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 MTND6P13-201ENST00000443510 523 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 SSXP1-201ENST00000453640 473 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 RNA5SP269-201ENST00000459032 137 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AP006587.4-201ENST00000526053 529 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AP000867.2-201ENST00000532468 320 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 HMGB1P6-201ENST00000569046 646 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AC136601.2-201ENST00000604356 474 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AC068276.1-201ENST00000605793 379 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AC025594.3-201ENST00000613068 790 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AC006338.1-201ENST00000618453 749 ntBASIC2.97□□□□□ -1.93
SNX25Q9H3E2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SNX25Q9H3E2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX25Q9H3E2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SNX25Q9H3E2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SNX25Q9H3E2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.96□□□□□ -1.94
SNX25Q9H3E2 AC010680.1-201ENST00000590024 3590 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 RNU4-91P-201ENST00000364778 135 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 RNU6-217P-201ENST00000384164 104 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 RNU6-1035P-201ENST00000384477 107 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 RNU6-297P-201ENST00000384636 107 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 RNY3P10-201ENST00000384764 102 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 MIR634-201ENST00000385208 97 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 AL138827.1-201ENST00000402666 306 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 RNU2-36P-201ENST00000410361 191 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX25Q9H3E2 ZNF90P2-204ENST00000419323 1075 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 RPS15AP12-201ENST00000419498 388 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.96□□□□□ -1.94
SNX25Q9H3E2 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.96□□□□□ -1.94
SNX25Q9H3E2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX25Q9H3E2 AL022238.1-201ENST00000442557 355 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 RPL39P40-201ENST00000445481 146 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX25Q9H3E2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.96□□□□□ -1.94
SNX25Q9H3E2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.96□□□□□ -1.94
SNX25Q9H3E2 AL031183.1-201ENST00000457667 207 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.96□□□□□ -1.94
SNX25Q9H3E2 AC087588.1-201ENST00000462203 316 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 RBM43P1-201ENST00000476891 1081 ntBASIC2.96□□□□□ -1.94
SNX25Q9H3E2 RAP1BP2-201ENST00000478270 544 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms