Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 AC024619.4-201ENST00000580924 316 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 MIR3162-201ENST00000581818 82 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 MIR4658-201ENST00000584344 65 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 AC007038.2-201ENST00000608095 740 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.54□□□□□ -2
POLR1EQ9GZS1 AC010329.5-201ENST00000623497 2174 ntBASIC2.54□□□□□ -2
POLR1EQ9GZS1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
POLR1EQ9GZS1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 MTND4P27-201ENST00000450813 1354 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
POLR1EQ9GZS1 AC080128.1-201ENST00000474389 1917 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 FAM133CP-201ENST00000332869 704 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 RNU6-1167P-201ENST00000363227 94 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 RNU1-73P-201ENST00000383971 164 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 Y_RNA.510-201ENST00000384511 114 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 MIR634-201ENST00000385208 97 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 ANAPC10P1-201ENST00000395991 556 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 RN7SKP266-201ENST00000410232 287 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 MTCO3P30-201ENST00000426425 670 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 AC098831.1-201ENST00000440661 216 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 RPS3P1-201ENST00000456781 192 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 AC023141.11-201ENST00000508864 202 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.53□□□□□ -2
POLR1EQ9GZS1 RNU4-29P-201ENST00000515943 174 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 RNA5SP165-201ENST00000517142 115 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 AP001372.4-201ENST00000524889 472 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 AC023824.2-201ENST00000566185 400 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 AC007151.1-201ENST00000572774 483 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 AC061975.8-201ENST00000587058 721 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 AC097468.3-201ENST00000607956 456 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 AL449363.1-201ENST00000617815 186 ntBASIC2.53□□□□□ -2
POLR1EQ9GZS1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
POLR1EQ9GZS1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 RNU6-723P-201ENST00000383973 107 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 RPL17P50-201ENST00000396131 546 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 RSL24D1P4-201ENST00000400938 484 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 AL162578.1-201ENST00000406202 378 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 RNU2-68P-201ENST00000410878 191 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 MTCO2P17-201ENST00000424336 677 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 RPS12P2-201ENST00000439728 269 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 AC128713.1-201ENST00000471495 306 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 RPL23AP45-201ENST00000476406 468 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 AC106872.3-201ENST00000495104 446 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 RNU5A-4P-201ENST00000516588 111 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 AC136618.2-201ENST00000575091 400 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 AL391001.1-201ENST00000602747 715 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 DPPA3P3-201ENST00000603842 430 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 AC006023.1-201ENST00000603944 259 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 HMGB1P24-202ENST00000615653 685 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 AC131280.1-202ENST00000624067 4211 ntBASIC2.52□□□□□ -2.01
POLR1EQ9GZS1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 AL136360.1-201ENST00000503377 1900 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 RNU6-931P-201ENST00000363850 107 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 SNORA67.1-201ENST00000364749 141 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 MIR19A-201ENST00000384878 82 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 RPL26P27-201ENST00000414397 437 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 GPM6BP2-201ENST00000432046 144 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 FAM103A2P-201ENST00000444122 354 ntBASIC2.51□□□□□ -2.01
POLR1EQ9GZS1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms