Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MIR5571-201ENST00000577998 113 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 AP002906.1-201ENST00000603405 233 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 RPAP2P1-201ENST00000603626 1168 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 SNORD14A-201ENST00000606526 91 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 AC010678.1-201ENST00000614118 713 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 AC091834.1-201ENST00000614543 472 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 AL158801.5-201ENST00000623123 465 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 MIR7157-201ENST00000635801 60 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 AL354685.2-201ENST00000448218 1447 ntBASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
UPF3BQ9BZI7 SNORA3A-201ENST00000364113 130 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 SNORD48-201ENST00000364953 64 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 RNU6-750P-201ENST00000390946 107 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AL133264.1-201ENST00000407157 562 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 RNU2-28P-201ENST00000410457 189 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 RNA5SP270-201ENST00000411361 118 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AL136133.1-201ENST00000413694 376 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AC019178.2-201ENST00000423595 505 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 HMGB1P27-201ENST00000431429 603 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 MTND2P5-201ENST00000432656 1006 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 MTATP6P7-201ENST00000453315 681 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AC013828.1-201ENST00000481845 158 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 SNORA25.15-201ENST00000516487 89 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 RNA5SP490-201ENST00000517141 136 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AL132857.1-201ENST00000555180 708 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AC091946.2-201ENST00000606105 291 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 OR10AB1P-201ENST00000609613 938 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AC004009.2-201ENST00000623016 728 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AL590396.4-201ENST00000636779 956 ntBASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
UPF3BQ9BZI7 AC009487.4-201ENST00000624969 3585 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 RNU6-457P-201ENST00000363999 107 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 RNA5SP190-201ENST00000365222 118 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 MIR506-201ENST00000384998 124 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 AL158050.1-201ENST00000416077 457 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 RPS15AP12-201ENST00000419498 388 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 AC234064.1-201ENST00000436312 247 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 RPL23AP63-201ENST00000498752 471 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 AC091860.1-201ENST00000505723 432 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 RNU6-1256P-201ENST00000516539 103 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 RNU2-44P-201ENST00000516795 194 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 AC040174.2-201ENST00000602701 465 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 AC012493.3-201ENST00000604494 112 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 SDR42E1P2-201ENST00000614861 481 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 SDR42E1P4-201ENST00000620894 481 ntBASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
UPF3BQ9BZI7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 SUGT1P1-201ENST00000379514 476 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 MIR217-201ENST00000384817 110 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 MIR888-201ENST00000401186 77 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 RNU6-1328P-201ENST00000410938 106 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 RPL23AP39-201ENST00000415533 405 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 AP1B1P2-201ENST00000416196 106 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 AC246680.2-201ENST00000422106 389 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 PPP1R11P2-201ENST00000423543 382 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 DDX3P2-201ENST00000446138 111 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 AL096803.2-201ENST00000450032 677 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 MTND3P4-201ENST00000453537 303 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 PPP1R2P5-201ENST00000457256 603 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 LARP7P2-201ENST00000575306 125 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 MIR3683-201ENST00000580847 82 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 HMGN2P15-201ENST00000585707 270 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 AP001542.2-201ENST00000593141 364 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 AL450336.1-201ENST00000605180 586 ntBASIC2.11□□□□□ -2.07
UPF3BQ9BZI7 AC027514.1-201ENST00000588561 1603 ntBASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 MIR1294-201ENST00000408503 142 ntBASIC2.1□□□□□ -2.07
UPF3BQ9BZI7 MTCO3P1-205ENST00000422088 832 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms