Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 Y_RNA.784-201ENST00000613803 101 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 Y_RNA.787-201ENST00000616522 101 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 Y_RNA.780-201ENST00000617336 101 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 Y_RNA.801-201ENST00000619005 101 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 AP005019.3-201ENST00000620418 560 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.62□□□□□ -1.99
LITAFQ99732 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC2.62□□□□□ -1.99
LITAFQ99732 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.62□□□□□ -1.99
LITAFQ99732 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
LITAFQ99732 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LITAFQ99732 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LITAFQ99732 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LITAFQ99732 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.62□□□□□ -1.99
LITAFQ99732 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
LITAFQ99732 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
LITAFQ99732 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LITAFQ99732 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.61□□□□□ -1.99
LITAFQ99732 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
LITAFQ99732 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LITAFQ99732 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LITAFQ99732 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.61□□□□□ -1.99
LITAFQ99732 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
LITAFQ99732 RN7SKP44-201ENST00000363602 316 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 RNU6-266P-201ENST00000364225 107 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 SNORD42.2-201ENST00000365570 69 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LITAFQ99732 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LITAFQ99732 SNORA70F-201ENST00000384142 135 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 Y_RNA.482-201ENST00000384377 111 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 MIR301A-201ENST00000385261 86 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LITAFQ99732 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LITAFQ99732 AL133270.1-201ENST00000402635 279 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 RN7SKP229-201ENST00000410465 302 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 RN7SKP177-201ENST00000410567 355 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 SNORA57.3-201ENST00000411095 141 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LITAFQ99732 RPL7P37-201ENST00000425095 738 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.61□□□□□ -1.99
LITAFQ99732 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.61□□□□□ -1.99
LITAFQ99732 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.61□□□□□ -1.99
LITAFQ99732 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.61□□□□□ -1.99
LITAFQ99732 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.61□□□□□ -1.99
LITAFQ99732 RNU7-152P-201ENST00000458982 64 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AC005532.2-201ENST00000467154 373 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AC027575.1-201ENST00000481064 460 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 RPL31P13-201ENST00000484151 370 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AC079140.5-201ENST00000507882 310 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AC005921.1-201ENST00000510589 286 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AC005741.1-201ENST00000511094 432 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.61□□□□□ -1.99
LITAFQ99732 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC2.61□□□□□ -1.99
LITAFQ99732 AC087854.1-201ENST00000519706 414 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.61□□□□□ -1.99
LITAFQ99732 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC2.61□□□□□ -1.99
LITAFQ99732 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.61□□□□□ -1.99
LITAFQ99732 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.61□□□□□ -1.99
LITAFQ99732 AL163153.1-201ENST00000554223 283 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.61□□□□□ -1.99
LITAFQ99732 AC020661.2-201ENST00000560114 134 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.61□□□□□ -1.99
LITAFQ99732 AC025627.2-201ENST00000576220 160 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 MIR1273C-201ENST00000578669 77 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AC078795.3-201ENST00000602913 472 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AC124303.1-201ENST00000605703 360 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 MIR7151-201ENST00000617477 60 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AC092628.2-201ENST00000622492 339 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 AL031601.2-202ENST00000622650 282 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.61□□□□□ -1.99
LITAFQ99732 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.61□□□□□ -1.99
LITAFQ99732 AC058791.1-201ENST00000608412 3198 ntBASIC2.61□□□□□ -1.99
LITAFQ99732 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LITAFQ99732 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LITAFQ99732 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LITAFQ99732 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LITAFQ99732 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LITAFQ99732 USP8P1-201ENST00000494673 3183 ntBASIC2.6□□□□□ -1.99
LITAFQ99732 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LITAFQ99732 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LITAFQ99732 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LITAFQ99732 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LITAFQ99732 RAD17P1-201ENST00000418130 2042 ntBASIC2.6□□□□□ -1.99
LITAFQ99732 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LITAFQ99732 MIR323A-201ENST00000362199 86 ntBASIC2.6□□□□□ -1.99
LITAFQ99732 RNU6-600P-201ENST00000362524 99 ntBASIC2.6□□□□□ -1.99
LITAFQ99732 Y_RNA.132-201ENST00000363421 102 ntBASIC2.6□□□□□ -1.99
LITAFQ99732 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LITAFQ99732 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC2.6□□□□□ -1.99
LITAFQ99732 MTCYBP4-201ENST00000401524 249 ntBASIC2.6□□□□□ -1.99
LITAFQ99732 RNU6-607P-201ENST00000411283 108 ntBASIC2.6□□□□□ -1.99
LITAFQ99732 AL353621.1-201ENST00000418219 243 ntBASIC2.6□□□□□ -1.99
LITAFQ99732 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.6□□□□□ -1.99
LITAFQ99732 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.6□□□□□ -1.99
LITAFQ99732 RPL31P12-201ENST00000422587 358 ntBASIC2.6□□□□□ -1.99
LITAFQ99732 AL590632.1-201ENST00000424289 371 ntBASIC2.6□□□□□ -1.99
LITAFQ99732 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC2.6□□□□□ -1.99
LITAFQ99732 VDAC1P3-201ENST00000434069 851 ntBASIC2.6□□□□□ -1.99
LITAFQ99732 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
LITAFQ99732 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.6□□□□□ -1.99
LITAFQ99732 AL359672.1-201ENST00000442302 409 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms