Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
VAT1Q99536 RNU2-72P-201ENST00000411175 163 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 RNU6-516P-201ENST00000411381 104 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 RPL17P12-201ENST00000413391 526 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.97□□□□□ -2.09
VAT1Q99536 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 MED14P1-201ENST00000430517 648 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.97□□□□□ -2.09
VAT1Q99536 MTND5P14-201ENST00000441481 1267 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.97□□□□□ -2.09
VAT1Q99536 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.97□□□□□ -2.09
VAT1Q99536 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.97□□□□□ -2.09
VAT1Q99536 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VAT1Q99536 MTND1P9-201ENST00000453775 944 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 AC022493.1-201ENST00000492984 337 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.97□□□□□ -2.09
VAT1Q99536 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
VAT1Q99536 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VAT1Q99536 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.97□□□□□ -2.09
VAT1Q99536 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.97□□□□□ -2.09
VAT1Q99536 RNY4P37-201ENST00000516225 96 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 SNORA31.6-201ENST00000516241 130 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 OR11H5P-201ENST00000554039 926 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 MIR5571-201ENST00000577998 113 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 AC126365.2-201ENST00000580630 379 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 MIR4448-201ENST00000584360 86 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.97□□□□□ -2.09
VAT1Q99536 AC008121.1-201ENST00000603244 268 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.97□□□□□ -2.09
VAT1Q99536 AC124016.2-201ENST00000610058 665 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 AC084824.5-201ENST00000612009 413 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 AC018926.1-201ENST00000616335 435 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 AL512427.1-201ENST00000618593 349 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 AC009268.2-201ENST00000621925 457 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
VAT1Q99536 AC231657.1-201ENST00000624313 397 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VAT1Q99536 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
VAT1Q99536 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
VAT1Q99536 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.97□□□□□ -2.09
VAT1Q99536 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.96□□□□□ -2.09
VAT1Q99536 RNU6-1083P-201ENST00000384022 107 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 SUMO2P12-201ENST00000405924 140 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 TXNP7-201ENST00000406296 293 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.96□□□□□ -2.1
VAT1Q99536 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.96□□□□□ -2.1
VAT1Q99536 AC096649.2-201ENST00000416186 393 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 MTND4P3-201ENST00000417829 541 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.96□□□□□ -2.1
VAT1Q99536 COX7BP2-201ENST00000437976 242 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.96□□□□□ -2.1
VAT1Q99536 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.96□□□□□ -2.1
VAT1Q99536 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.96□□□□□ -2.1
VAT1Q99536 MTND1P31-201ENST00000449206 961 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 MTATP6P7-201ENST00000453315 681 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.96□□□□□ -2.1
VAT1Q99536 AC092902.1-201ENST00000486999 259 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 AL160314.1-201ENST00000490836 438 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 RPS27AP10-201ENST00000496103 208 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 ANXA2P1-201ENST00000505539 926 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.96□□□□□ -2.1
VAT1Q99536 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.96□□□□□ -2.1
VAT1Q99536 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.96□□□□□ -2.1
VAT1Q99536 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.96□□□□□ -2.1
VAT1Q99536 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.96□□□□□ -2.1
VAT1Q99536 AC091544.4-201ENST00000555268 342 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.96□□□□□ -2.1
VAT1Q99536 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.96□□□□□ -2.1
VAT1Q99536 MIR3199-1-201ENST00000582434 88 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.96□□□□□ -2.1
VAT1Q99536 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.96□□□□□ -2.1
VAT1Q99536 AL357094.1-201ENST00000603845 844 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 AC239868.4-201ENST00000608318 671 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.96□□□□□ -2.1
VAT1Q99536 TUG1_2.1-201ENST00000614234 87 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 SDR42E1P2-201ENST00000614861 481 ntBASIC1.96□□□□□ -2.1
VAT1Q99536 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.96□□□□□ -2.1
VAT1Q99536 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.96□□□□□ -2.1
VAT1Q99536 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VAT1Q99536 AC104454.1-201ENST00000421341 1401 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 RNA5SP88-201ENST00000365560 109 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 MIR218-1-201ENST00000384999 110 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 AL590084.2-201ENST00000401481 382 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.95□□□□□ -2.1
VAT1Q99536 MTND1P21-201ENST00000412991 285 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 EIF1AXP1-201ENST00000419267 435 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 AC007560.1-201ENST00000426912 237 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.95□□□□□ -2.1
VAT1Q99536 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.95□□□□□ -2.1
VAT1Q99536 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.95□□□□□ -2.1
VAT1Q99536 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VAT1Q99536 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.95□□□□□ -2.1
VAT1Q99536 DYNLL1P5-201ENST00000467158 270 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.95□□□□□ -2.1
VAT1Q99536 MTAPP1-201ENST00000489154 819 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.95□□□□□ -2.1
VAT1Q99536 AC107393.1-201ENST00000512403 346 ntBASIC1.95□□□□□ -2.1
VAT1Q99536 MTND2P31-201ENST00000512602 616 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms