Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 MIR6863-201ENST00000636112 90 ntBASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AC099654.12-201ENST00000639868 649 ntBASIC3.23□□□□□ -1.89
NR1H4Q96RI1 AC103710.2-202ENST00000641454 2853 ntBASIC3.23□□□□□ -1.89
NR1H4Q96RI1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.23□□□□□ -1.89
NR1H4Q96RI1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC010680.1-201ENST00000590024 3590 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 RNU6-1287P-201ENST00000362914 107 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 RNU6-884P-201ENST00000363889 107 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 SNORA70C-201ENST00000384538 135 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 RNU6-1060P-201ENST00000384664 107 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 SNORA46-201ENST00000384762 135 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 OR51A5P-201ENST00000415429 942 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 RPL21P40-201ENST00000428586 483 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 UQCRHP3-201ENST00000451503 251 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC006512.1-201ENST00000468816 291 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC104472.2-201ENST00000469035 601 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 RPL7P19-201ENST00000469948 618 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 TRBV1-201ENST00000476502 284 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC233702.1-201ENST00000482905 502 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 RPL9P6-201ENST00000492764 598 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC109927.2-201ENST00000506416 303 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC104806.1-201ENST00000508720 308 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 SNORA31.21-201ENST00000517180 77 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 RNU6-1315P-201ENST00000517187 99 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC025449.1-201ENST00000603896 529 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC067959.1-201ENST00000604334 379 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AL670379.4-201ENST00000605279 254 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 MIR15A-201ENST00000607334 83 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 MIR6716-201ENST00000613413 80 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC005609.4-201ENST00000625071 447 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 OR52H1-202ENST00000641796 1061 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 AC103988.1-201ENST00000566382 2177 ntBASIC3.22□□□□□ -1.89
NR1H4Q96RI1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NR1H4Q96RI1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 RNA5SP139-201ENST00000364340 117 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 SNORA56-201ENST00000383966 129 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 Y_RNA.534-201ENST00000384599 112 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 CISD1P1-201ENST00000393907 327 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 Y_RNA.625-201ENST00000411256 107 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 NDUFS5P4-201ENST00000412983 318 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 MRPL50P2-201ENST00000416821 482 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 PSPHP1-201ENST00000450062 261 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 AC128713.1-201ENST00000471495 306 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 AC026979.1-201ENST00000492525 396 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 RNU6-720P-201ENST00000516363 108 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 AP003034.1-201ENST00000534621 422 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 AL391261.3-201ENST00000557194 520 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 MTCO3P24-201ENST00000572729 782 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NR1H4Q96RI1 MTND4P35-201ENST00000604257 1375 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 ZNF680P1-201ENST00000436625 1469 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 AP004289.2-201ENST00000444413 1457 ntBASIC3.21□□□□□ -1.9
NR1H4Q96RI1 Y_RNA.159-201ENST00000363674 87 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms