Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL390240.1-201ENST00000612950 384 ntBASIC0.61□□□□□ -2.31
CSMD1Q96PZ7 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.61□□□□□ -2.31
CSMD1Q96PZ7 OR4G2P-201ENST00000328113 903 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 SNORA4.3-201ENST00000365564 137 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 AP003327.1-201ENST00000529684 127 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 AC007792.1-201ENST00000623023 402 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 AC004022.2-201ENST00000413824 193 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 PTP4A1P1-201ENST00000420539 515 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 RPS20P20-201ENST00000460498 340 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 AC091965.2-201ENST00000512324 613 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 Y_RNA.25-201ENST00000362528 102 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 MIR17-201ENST00000385012 84 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 SNX3P1X-201ENST00000414887 175 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 RFESDP1-201ENST00000422350 461 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 AC119618.1-201ENST00000434191 222 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 MIR4458-201ENST00000578872 75 ntBASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
CSMD1Q96PZ7 AC096632.1-201ENST00000427395 310 ntBASIC0.59□□□□□ -2.31
CSMD1Q96PZ7 HMGN2P10-201ENST00000448085 265 ntBASIC0.59□□□□□ -2.31
CSMD1Q96PZ7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.59□□□□□ -2.31
CSMD1Q96PZ7 SUMO2P2-201ENST00000456482 255 ntBASIC0.59□□□□□ -2.31
CSMD1Q96PZ7 KLRA1P-201ENST00000503499 986 ntBASIC0.59□□□□□ -2.31
CSMD1Q96PZ7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.59□□□□□ -2.31
CSMD1Q96PZ7 RNU6-229P-201ENST00000516614 102 ntBASIC0.59□□□□□ -2.31
CSMD1Q96PZ7 AC009090.3-201ENST00000616553 565 ntBASIC0.59□□□□□ -2.31
CSMD1Q96PZ7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
CSMD1Q96PZ7 SNORA8.3-201ENST00000384679 139 ntBASIC0.59□□□□□ -2.32
CSMD1Q96PZ7 MIR153-2-201ENST00000385225 87 ntBASIC0.59□□□□□ -2.32
CSMD1Q96PZ7 PTGES3P2-201ENST00000407942 482 ntBASIC0.59□□□□□ -2.32
CSMD1Q96PZ7 AC010099.1-201ENST00000455434 375 ntBASIC0.59□□□□□ -2.32
CSMD1Q96PZ7 TRBVB-201ENST00000477100 408 ntBASIC0.59□□□□□ -2.32
CSMD1Q96PZ7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.59□□□□□ -2.32
CSMD1Q96PZ7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.59□□□□□ -2.32
CSMD1Q96PZ7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.59□□□□□ -2.32
CSMD1Q96PZ7 AC079597.1-201ENST00000624306 508 ntBASIC0.59□□□□□ -2.32
CSMD1Q96PZ7 RNA5SP299-201ENST00000391203 116 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 RNU4-72P-201ENST00000410754 173 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AL121769.1-201ENST00000469473 401 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 RLIMP2-201ENST00000427891 1563 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 RNA5SP368-201ENST00000364298 116 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 UBBP3-201ENST00000445497 241 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 RPS27P26-201ENST00000494583 239 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AC091435.1-201ENST00000505442 584 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 MTND3P24-201ENST00000506306 329 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AC098591.2-201ENST00000510152 315 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AC005741.1-201ENST00000511094 432 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 RNA5SP471-201ENST00000516971 106 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AC091812.1-201ENST00000432235 1948 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AC092648.1-201ENST00000425870 423 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 RPS27P23-201ENST00000487608 251 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AL138976.2-201ENST00000563989 694 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AC024060.1-201ENST00000607052 494 ntBASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CSMD1Q96PZ7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 RNY4P24-201ENST00000362735 96 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 RPL31P52-201ENST00000407532 367 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 RNU6-955P-201ENST00000410497 104 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 AL356379.1-201ENST00000414105 126 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 HMGB3P17-201ENST00000504195 649 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 CDC42P4-201ENST00000510507 563 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 MTCO1P23-201ENST00000415223 1526 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 SNORA46.1-201ENST00000391069 153 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 MTCO1P3-201ENST00000429327 192 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 AC096745.1-201ENST00000509945 370 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 SUB1P1-201ENST00000524415 382 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 MIR518A2-201ENST00000384966 87 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 HMGB3P3-201ENST00000510526 400 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 AF279873.1-201ENST00000523393 313 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 MIR4512-201ENST00000583257 77 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 AC023932.2-201ENST00000603176 175 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 AC106052.1-201ENST00000608029 497 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 AC007275.1-201ENST00000621243 671 ntBASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.57□□□□□ -2.32
CSMD1Q96PZ7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms