Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNA5SP189-201ENST00000364920 115 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 SNORD23.1-201ENST00000408212 104 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.65□□□□□ -2.31
CFAP54Q96N23 AC091435.1-201ENST00000505442 584 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 AL162373.1-201ENST00000620433 407 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 AP003485.1-201ENST00000625093 753 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 AC091812.1-201ENST00000432235 1948 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 RNU6-48P-201ENST00000384161 107 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 HMGB3P3-201ENST00000510526 400 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 AF279873.1-201ENST00000523393 313 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 AP003484.1-201ENST00000530974 250 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 CYCSP26-201ENST00000534107 320 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 AC243829.3-201ENST00000622177 108 ntBASIC0.65□□□□□ -2.31
CFAP54Q96N23 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.64□□□□□ -2.31
CFAP54Q96N23 MTCO1P3-201ENST00000429327 192 ntBASIC0.64□□□□□ -2.31
CFAP54Q96N23 AL356867.1-201ENST00000429623 299 ntBASIC0.64□□□□□ -2.31
CFAP54Q96N23 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.64□□□□□ -2.31
CFAP54Q96N23 PMCHL2-203ENST00000457791 237 ntBASIC0.64□□□□□ -2.31
CFAP54Q96N23 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CFAP54Q96N23 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.64□□□□□ -2.31
CFAP54Q96N23 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
CFAP54Q96N23 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CFAP54Q96N23 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CFAP54Q96N23 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
CFAP54Q96N23 AC096533.1-201ENST00000411645 353 ntBASIC0.64□□□□□ -2.31
CFAP54Q96N23 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.64□□□□□ -2.31
CFAP54Q96N23 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.64□□□□□ -2.31
CFAP54Q96N23 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.64□□□□□ -2.31
CFAP54Q96N23 RNU6-711P-201ENST00000517255 106 ntBASIC0.64□□□□□ -2.31
CFAP54Q96N23 AC008749.1-201ENST00000597650 306 ntBASIC0.64□□□□□ -2.31
CFAP54Q96N23 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.64□□□□□ -2.31
CFAP54Q96N23 AL161734.1-201ENST00000609720 557 ntBASIC0.64□□□□□ -2.31
CFAP54Q96N23 MIR6718-201ENST00000616153 80 ntBASIC0.64□□□□□ -2.31
CFAP54Q96N23 AC007275.1-201ENST00000621243 671 ntBASIC0.64□□□□□ -2.31
CFAP54Q96N23 AC008555.8-201ENST00000623602 2168 ntBASIC0.64□□□□□ -2.31
CFAP54Q96N23 Y_RNA.132-201ENST00000363421 102 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 RNY3-201ENST00000365484 102 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 AC244453.4-201ENST00000419150 388 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 AC246680.2-201ENST00000422106 389 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 AL161788.1-201ENST00000441805 169 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 HMGB3P17-201ENST00000504195 649 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 HSBP1P1-201ENST00000555205 166 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 AC109809.1-201ENST00000619665 545 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 AC100821.1-201ENST00000523153 2479 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 MTCO1P23-201ENST00000415223 1526 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 RNU6-185P-201ENST00000384421 107 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.63□□□□□ -2.31
CFAP54Q96N23 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.63□□□□□ -2.31
CFAP54Q96N23 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.63□□□□□ -2.31
CFAP54Q96N23 PCNAP1-201ENST00000505363 709 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 AC004812.1-201ENST00000540773 146 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.63□□□□□ -2.31
CFAP54Q96N23 AC008269.2-201ENST00000561915 1105 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 AC135178.6-201ENST00000605314 398 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 PTP4A1P1-201ENST00000420539 515 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 RPL37P6-202ENST00000464216 403 ntBASIC0.63□□□□□ -2.31
CFAP54Q96N23 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 AC073614.1-201ENST00000438690 650 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 AL035666.1-201ENST00000446195 348 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.62□□□□□ -2.31
CFAP54Q96N23 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CFAP54Q96N23 AC006065.5-201ENST00000623427 349 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
CFAP54Q96N23 OR5H6-203ENST00000642105 978 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CFAP54Q96N23 Z82195.2-201ENST00000612348 18351 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 CBX3P1-201ENST00000325243 554 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 SNORA9.1-201ENST00000362412 131 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 SNORD56-201ENST00000413522 71 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 RPL17P49-201ENST00000443728 411 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 RPS27P26-201ENST00000494583 239 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.62□□□□□ -2.31
CFAP54Q96N23 RNU6-970P-201ENST00000516312 107 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 RPL21P136-201ENST00000605378 396 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 AC087045.1-201ENST00000605856 382 ntBASIC0.62□□□□□ -2.31
CFAP54Q96N23 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CFAP54Q96N23 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.62□□□□□ -2.31
CFAP54Q96N23 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CFAP54Q96N23 AC073055.1-201ENST00000456901 1621 ntBASIC0.61□□□□□ -2.31
CFAP54Q96N23 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.61□□□□□ -2.31
CFAP54Q96N23 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CFAP54Q96N23 UBBP3-201ENST00000445497 241 ntBASIC0.61□□□□□ -2.31
CFAP54Q96N23 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.61□□□□□ -2.31
CFAP54Q96N23 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.61□□□□□ -2.31
CFAP54Q96N23 AC009902.3-201ENST00000606235 2172 ntBASIC0.61□□□□□ -2.31
CFAP54Q96N23 AC060773.1-201ENST00000421698 310 ntBASIC0.61□□□□□ -2.31
CFAP54Q96N23 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CFAP54Q96N23 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.61□□□□□ -2.31
CFAP54Q96N23 AC009974.1-201ENST00000608881 455 ntBASIC0.61□□□□□ -2.31
CFAP54Q96N23 RLIMP2-201ENST00000427891 1563 ntBASIC0.61□□□□□ -2.31
CFAP54Q96N23 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CFAP54Q96N23 RPL31P52-201ENST00000407532 367 ntBASIC0.61□□□□□ -2.31
CFAP54Q96N23 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.61□□□□□ -2.31
CFAP54Q96N23 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.61□□□□□ -2.31
CFAP54Q96N23 AC021646.1-201ENST00000605469 484 ntBASIC0.61□□□□□ -2.31
CFAP54Q96N23 uc_338.14-201ENST00000613162 166 ntBASIC0.61□□□□□ -2.31
CFAP54Q96N23 MIR6866-201ENST00000638146 69 ntBASIC0.61□□□□□ -2.31
CFAP54Q96N23 RPS27P23-201ENST00000487608 251 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms