Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AC008571.1-201ENST00000467232 300 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AC072039.1-201ENST00000477611 581 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 MTND1P24-201ENST00000552175 861 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AL359212.1-201ENST00000556608 614 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AP000403.1-201ENST00000603349 851 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AC090970.3-201ENST00000612566 866 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AL136313.1-201ENST00000624804 202 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.79□□□□□ -1.96
ZNF560Q96MR9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
ZNF560Q96MR9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AL161431.1-201ENST00000618966 4205 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 Y_RNA.46-201ENST00000362695 102 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AL139095.1-201ENST00000404326 391 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AL139397.2-201ENST00000404529 772 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 HIGD1AP15-201ENST00000416198 280 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 MTND1P28-201ENST00000435623 950 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 RPL37P21-201ENST00000435890 276 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 MTCO1P42-201ENST00000457379 726 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 RPL26P9-201ENST00000457466 433 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 RPL36AP51-201ENST00000487216 318 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 RPF2P2-201ENST00000504693 896 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 RNU4-29P-201ENST00000515943 174 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 SNORA3.4-201ENST00000515969 96 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 SNORA31.3-201ENST00000516029 96 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 RNU6-826P-201ENST00000516827 104 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AP000889.1-201ENST00000530968 660 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AC243972.3-201ENST00000539655 198 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AL356432.3-201ENST00000568952 465 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AC008751.2-201ENST00000597885 980 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 KC877982.1-201ENST00000602313 470 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 MTND4LP5-201ENST00000605152 292 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AC004805.2-201ENST00000605382 482 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AC079395.3-201ENST00000615161 484 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AC023510.2-201ENST00000622162 746 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 AC026241.1-201ENST00000517873 2142 ntBASIC2.78□□□□□ -1.96
ZNF560Q96MR9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
ZNF560Q96MR9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
ZNF560Q96MR9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ZNF560Q96MR9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ZNF560Q96MR9 RNU6-660P-201ENST00000364566 109 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 U8.14-201ENST00000390843 143 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 RNU2-25P-201ENST00000411041 191 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 BTF3L4P3-201ENST00000418879 476 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 RPS27AP14-201ENST00000422868 454 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.77□□□□□ -1.97
ZNF560Q96MR9 AC010153.1-201ENST00000432862 727 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 AL008629.1-201ENST00000438615 184 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 AC103975.1-201ENST00000482506 483 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 RPL9P33-201ENST00000484311 566 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.77□□□□□ -1.97
ZNF560Q96MR9 SRIP1-201ENST00000489235 288 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.77□□□□□ -1.97
ZNF560Q96MR9 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.77□□□□□ -1.97
ZNF560Q96MR9 RNU6-201P-201ENST00000517100 61 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.77□□□□□ -1.97
ZNF560Q96MR9 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.77□□□□□ -1.97
ZNF560Q96MR9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.77□□□□□ -1.97
ZNF560Q96MR9 AL161798.1-201ENST00000604630 131 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 AC026790.2-201ENST00000606282 430 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ZNF560Q96MR9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.77□□□□□ -1.97
ZNF560Q96MR9 MIR6817-201ENST00000615588 66 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 AC140725.3-201ENST00000616193 880 ntBASIC2.77□□□□□ -1.97
ZNF560Q96MR9 AC104454.1-201ENST00000421341 1401 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 Y_RNA.97-201ENST00000363094 102 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 AC023141.4-201ENST00000412031 328 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 NDUFS5P4-201ENST00000412983 318 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 FCF1P1-201ENST00000432690 571 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 RPS3P1-201ENST00000456781 192 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 RN7SL297P-201ENST00000483161 293 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 LINC00888-204ENST00000487386 421 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.76□□□□□ -1.97
ZNF560Q96MR9 GLYCAM1-201ENST00000546596 285 ntBASIC2.76□□□□□ -1.97
ZNF560Q96MR9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms