Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC104563.1-201ENST00000476147 376 ntBASIC2.19□□□□□ -2.06
C9orf72Q96LT7 AL160314.1-201ENST00000490836 438 ntBASIC2.19□□□□□ -2.06
C9orf72Q96LT7 AC098591.2-201ENST00000510152 315 ntBASIC2.19□□□□□ -2.06
C9orf72Q96LT7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.19□□□□□ -2.06
C9orf72Q96LT7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.19□□□□□ -2.06
C9orf72Q96LT7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.19□□□□□ -2.06
C9orf72Q96LT7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.19□□□□□ -2.06
C9orf72Q96LT7 AC135628.1-201ENST00000568867 534 ntBASIC2.19□□□□□ -2.06
C9orf72Q96LT7 MIR3124-201ENST00000582636 67 ntBASIC2.19□□□□□ -2.06
C9orf72Q96LT7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
C9orf72Q96LT7 AC104763.3-201ENST00000613765 618 ntBASIC2.19□□□□□ -2.06
C9orf72Q96LT7 AL449363.1-201ENST00000617815 186 ntBASIC2.19□□□□□ -2.06
C9orf72Q96LT7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.19□□□□□ -2.06
C9orf72Q96LT7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.19□□□□□ -2.06
C9orf72Q96LT7 MTND4P27-201ENST00000450813 1354 ntBASIC2.19□□□□□ -2.06
C9orf72Q96LT7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AL590084.2-201ENST00000401481 382 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 MTND1P21-201ENST00000412991 285 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 USP9YP13-201ENST00000417797 480 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AL449283.1-202ENST00000418249 604 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 BTF3L4P3-201ENST00000418879 476 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 OSTCP8-201ENST00000445117 448 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 snoU13.26-201ENST00000459452 105 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 MEMO1P3-201ENST00000459811 302 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AL121769.1-201ENST00000469473 401 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AC023141.11-201ENST00000508864 202 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AC022447.1-201ENST00000515358 464 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 RNU6-390P-201ENST00000516259 103 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 RNA5SP290-201ENST00000517133 127 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 IGKV3-31-201ENST00000523109 329 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AL359212.1-201ENST00000556608 614 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 CYCSP2-201ENST00000558168 301 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 RPS3AP23-202ENST00000574601 686 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AL357094.1-201ENST00000603845 844 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.18□□□□□ -2.06
C9orf72Q96LT7 MTND4P35-201ENST00000604257 1375 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 AL390862.1-201ENST00000635467 1469 ntBASIC2.18□□□□□ -2.06
C9orf72Q96LT7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
C9orf72Q96LT7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
C9orf72Q96LT7 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.17□□□□□ -2.06
C9orf72Q96LT7 RNU6-289P-201ENST00000364093 107 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 RNU6-744P-201ENST00000365557 107 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 RNU6-1316P-201ENST00000384242 108 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 RNU6-220P-201ENST00000390919 107 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 HMGB3P2-201ENST00000411913 584 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 MTCYBP38-201ENST00000417160 1123 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 BPY2DP-201ENST00000422208 265 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 AC007560.1-201ENST00000426912 237 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 RPL35AP22-201ENST00000436855 335 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.17□□□□□ -2.06
C9orf72Q96LT7 MTCO2P25-201ENST00000447065 681 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 snoU13.15-201ENST00000459407 104 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 AC079804.2-201ENST00000490376 200 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 RPS15AP36-201ENST00000492022 382 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.17□□□□□ -2.06
C9orf72Q96LT7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.17□□□□□ -2.06
C9orf72Q96LT7 AC021451.1-201ENST00000523498 1129 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 AP000873.5-201ENST00000533906 236 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.17□□□□□ -2.06
C9orf72Q96LT7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.17□□□□□ -2.06
C9orf72Q96LT7 AC239868.4-201ENST00000608318 671 ntBASIC2.17□□□□□ -2.06
C9orf72Q96LT7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.17□□□□□ -2.06
C9orf72Q96LT7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.17□□□□□ -2.06
C9orf72Q96LT7 AC010889.1-201ENST00000566193 2666 ntBASIC2.16□□□□□ -2.06
C9orf72Q96LT7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 RNA5SP138-201ENST00000365098 114 ntBASIC2.16□□□□□ -2.06
C9orf72Q96LT7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 HMGB1P9-201ENST00000429856 646 ntBASIC2.16□□□□□ -2.06
C9orf72Q96LT7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 SNRPEP9-201ENST00000436794 238 ntBASIC2.16□□□□□ -2.06
C9orf72Q96LT7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 AC025033.1-201ENST00000463883 194 ntBASIC2.16□□□□□ -2.06
C9orf72Q96LT7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 RPL9P6-201ENST00000492764 598 ntBASIC2.16□□□□□ -2.06
C9orf72Q96LT7 RPS27AP10-201ENST00000496103 208 ntBASIC2.16□□□□□ -2.06
C9orf72Q96LT7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.16□□□□□ -2.06
C9orf72Q96LT7 AC092436.1-201ENST00000506450 503 ntBASIC2.16□□□□□ -2.06
C9orf72Q96LT7 RNA5SP200-201ENST00000516360 103 ntBASIC2.16□□□□□ -2.06
C9orf72Q96LT7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms