Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AC010265.1-201ENST00000513509 211 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 RNU1-103P-201ENST00000516502 125 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 CASP1P1-201ENST00000526345 212 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CALR3Q96L12 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.25□□□□□ -1.57
CALR3Q96L12 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.25□□□□□ -1.57
CALR3Q96L12 LINC00933-203ENST00000559812 219 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.25□□□□□ -1.57
CALR3Q96L12 RPS29P30-201ENST00000600975 111 ntBASIC5.25□□□□□ -1.57
CALR3Q96L12 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CALR3Q96L12 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CALR3Q96L12 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CALR3Q96L12 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.25□□□□□ -1.57
CALR3Q96L12 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.25□□□□□ -1.57
CALR3Q96L12 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CALR3Q96L12 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
CALR3Q96L12 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CALR3Q96L12 DEFB109C-201ENST00000382575 264 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 DEFB109B-201ENST00000382656 264 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 USP9YP16-201ENST00000430287 407 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 BX323845.1-201ENST00000432417 179 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 AC124916.1-201ENST00000444020 547 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.24□□□□□ -1.57
CALR3Q96L12 USP9YP23-201ENST00000455085 407 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 AC108751.2-201ENST00000469993 231 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.24□□□□□ -1.57
CALR3Q96L12 SNORA31.18-201ENST00000517043 134 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 AC090281.1-201ENST00000523019 276 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 AP000827.1-201ENST00000527814 258 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CALR3Q96L12 EDDM3DP-201ENST00000554692 434 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.24□□□□□ -1.57
CALR3Q96L12 AMZ2P1-203ENST00000565833 850 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.24□□□□□ -1.57
CALR3Q96L12 AC011447.4-201ENST00000587562 111 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 AC008521.2-201ENST00000591021 259 ntBASIC5.24□□□□□ -1.57
CALR3Q96L12 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CALR3Q96L12 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CALR3Q96L12 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.24□□□□□ -1.57
CALR3Q96L12 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CALR3Q96L12 OR56B2P-202ENST00000641377 2453 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 SCN1A-220ENST00000641603 12506 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 AL133412.1-201ENST00000380194 2992 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.23□□□□□ -1.57
CALR3Q96L12 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
CALR3Q96L12 RNU1-108P-201ENST00000362556 161 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 RNA5SP28-201ENST00000363841 119 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 RNU6-658P-201ENST00000384606 106 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 Y_RNA.592-201ENST00000410274 109 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.23□□□□□ -1.57
CALR3Q96L12 RBMY1KP-201ENST00000423480 476 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 SCARNA10-201ENST00000459255 330 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 RPL21P104-201ENST00000464143 478 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 AC009127.1-201ENST00000467090 155 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 AL132838.2-201ENST00000492041 314 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 UBE2CP3-201ENST00000502715 450 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.23□□□□□ -1.57
CALR3Q96L12 RN7SKP289-201ENST00000517244 295 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 AP004607.1-201ENST00000524456 203 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 H3F3AP1-201ENST00000559984 334 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.23□□□□□ -1.57
CALR3Q96L12 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.23□□□□□ -1.57
CALR3Q96L12 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.23□□□□□ -1.57
CALR3Q96L12 AL390123.1-201ENST00000603216 237 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 AC006077.1-201ENST00000604746 343 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 AC109309.2-201ENST00000612597 332 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 AL159153.1-201ENST00000619688 317 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.23□□□□□ -1.57
CALR3Q96L12 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.23□□□□□ -1.57
CALR3Q96L12 U2.21-201ENST00000637295 81 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CALR3Q96L12 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.23□□□□□ -1.57
CALR3Q96L12 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.23□□□□□ -1.57
CALR3Q96L12 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.23□□□□□ -1.57
CALR3Q96L12 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CALR3Q96L12 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CALR3Q96L12 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.23□□□□□ -1.57
CALR3Q96L12 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.23□□□□□ -1.57
CALR3Q96L12 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CALR3Q96L12 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.23□□□□□ -1.57
CALR3Q96L12 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CALR3Q96L12 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CALR3Q96L12 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.23□□□□□ -1.57
CALR3Q96L12 MAPK10-303ENST00000641324 3959 ntBASIC5.23□□□□□ -1.57
CALR3Q96L12 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CALR3Q96L12 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CALR3Q96L12 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CALR3Q96L12 Y_RNA.123-201ENST00000363338 102 ntBASIC5.22□□□□□ -1.57
CALR3Q96L12 Y_RNA.214-201ENST00000364201 112 ntBASIC5.22□□□□□ -1.57
CALR3Q96L12 Z98749.2-208ENST00000381646 500 ntBASIC5.22□□□□□ -1.57
CALR3Q96L12 Y_RNA.396-201ENST00000383949 103 ntBASIC5.22□□□□□ -1.57
CALR3Q96L12 SNORA66-201ENST00000384792 133 ntBASIC5.22□□□□□ -1.57
CALR3Q96L12 SNORA17A-201ENST00000391185 133 ntBASIC5.22□□□□□ -1.57
CALR3Q96L12 AL592291.1-201ENST00000403830 352 ntBASIC5.22□□□□□ -1.57
CALR3Q96L12 RPS20P14-201ENST00000412545 360 ntBASIC5.22□□□□□ -1.57
CALR3Q96L12 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.22□□□□□ -1.57
CALR3Q96L12 AL451050.1-201ENST00000450126 415 ntBASIC5.22□□□□□ -1.57
CALR3Q96L12 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms