Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.45□□□□□ -2.02
PKNOX2Q96KN3 DEFB131D-201ENST00000526803 184 ntBASIC2.45□□□□□ -2.02
PKNOX2Q96KN3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PKNOX2Q96KN3 OR6C7P-201ENST00000547875 934 ntBASIC2.45□□□□□ -2.02
PKNOX2Q96KN3 AL512347.1-201ENST00000566420 503 ntBASIC2.45□□□□□ -2.02
PKNOX2Q96KN3 LRRC37A5P-203ENST00000580181 585 ntBASIC2.45□□□□□ -2.02
PKNOX2Q96KN3 AL353997.4-201ENST00000586196 166 ntBASIC2.45□□□□□ -2.02
PKNOX2Q96KN3 BBIP1P1-201ENST00000602999 279 ntBASIC2.45□□□□□ -2.02
PKNOX2Q96KN3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.45□□□□□ -2.02
PKNOX2Q96KN3 ZNF833P-201ENST00000424938 1494 ntBASIC2.45□□□□□ -2.02
PKNOX2Q96KN3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PKNOX2Q96KN3 SNORA48.3-201ENST00000391081 134 ntBASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AL591416.1-201ENST00000404015 867 ntBASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 NDUFS5P1-201ENST00000405668 289 ntBASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 IFNA20P-201ENST00000436840 528 ntBASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AC007327.1-201ENST00000447461 264 ntBASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 RPL30P9-201ENST00000465586 330 ntBASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AL121769.1-201ENST00000469473 401 ntBASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AF129408.1-201ENST00000608767 431 ntBASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 FTX_3.1-201ENST00000610451 147 ntBASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AC096577.2-201ENST00000611455 153 ntBASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 AL159972.1-201ENST00000625150 448 ntBASIC2.44□□□□□ -2.02
PKNOX2Q96KN3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 AL161781.1-201ENST00000354277 403 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 RNU6-486P-201ENST00000363116 107 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 RNU6-621P-201ENST00000364752 109 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 RPL23AP29-201ENST00000397284 453 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 HMGN2P39-201ENST00000398005 273 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 TPMTP3-201ENST00000411928 735 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 MTND5P14-201ENST00000441481 1267 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 ZNF886P-201ENST00000450781 723 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 AL021397.1-201ENST00000451806 248 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 LARP1BP2-201ENST00000486594 519 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 HMGB1P36-201ENST00000487709 576 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 AC104685.1-201ENST00000502445 371 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 MRPS33P3-201ENST00000513456 322 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 MTCYBP23-201ENST00000558717 1102 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 MIR5195-201ENST00000583555 115 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 BNIP3P27-201ENST00000599991 412 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 AC069431.2-201ENST00000604149 1099 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 AC007179.3-201ENST00000604976 235 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 AL603758.1-201ENST00000618654 241 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 MIR1291-201ENST00000627649 87 ntBASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PKNOX2Q96KN3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 RNU6-97P-201ENST00000363387 104 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 RNU6-1078P-201ENST00000364522 103 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 RNA5SP212-201ENST00000391223 107 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AL360182.1-201ENST00000397433 468 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AL355143.1-201ENST00000407101 841 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 BX119904.4-201ENST00000424402 301 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AC008850.1-201ENST00000427546 362 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 RPL30P4-201ENST00000429309 333 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AC080014.1-201ENST00000496877 1201 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 RNU6-150P-201ENST00000516237 95 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AP003497.1-201ENST00000528472 562 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 NACAP3-201ENST00000552100 481 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 uc_338.14-201ENST00000613162 166 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 AC099654.8-201ENST00000637757 681 ntBASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
PKNOX2Q96KN3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.41□□□□□ -2.02
PKNOX2Q96KN3 Y_RNA.311-201ENST00000365068 96 ntBASIC2.41□□□□□ -2.02
PKNOX2Q96KN3 RNA5SP240-201ENST00000365355 128 ntBASIC2.41□□□□□ -2.02
PKNOX2Q96KN3 RNU6-637P-201ENST00000384050 107 ntBASIC2.41□□□□□ -2.02
PKNOX2Q96KN3 RNU6-1207P-201ENST00000384343 107 ntBASIC2.41□□□□□ -2.02
PKNOX2Q96KN3 MIR934-201ENST00000401241 83 ntBASIC2.41□□□□□ -2.02
PKNOX2Q96KN3 ERHP2-201ENST00000402323 299 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms