Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 U7.8-201ENST00000619968 63 ntBASIC3.81□□□□□ -1.8
CLPTM1LQ96KA5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
CLPTM1LQ96KA5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CLPTM1LQ96KA5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLPTM1LQ96KA5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 LARP1BP1-201ENST00000506036 1359 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 RNU6-1252P-201ENST00000363054 104 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 RNU4-76P-201ENST00000364509 141 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 MIR493-201ENST00000385254 89 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 MIR1251-201ENST00000408552 70 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 GPM6BP2-201ENST00000432046 144 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AC073063.1-201ENST00000434352 607 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 PIGFP3-201ENST00000441918 722 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 PHBP16-201ENST00000446318 950 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 GPM6BP1-201ENST00000446387 144 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AL360271.2-201ENST00000447710 161 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 snoU13.1-201ENST00000459157 104 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 RN7SL691P-201ENST00000494487 301 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 MTCO1P29-201ENST00000496868 288 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 TBCAP3-201ENST00000512475 312 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 RNU6-1069P-201ENST00000516612 133 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 RNA5SP290-201ENST00000517133 127 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 CYCSP27-201ENST00000527643 293 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AC093027.1-201ENST00000546698 429 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 TRAV28-201ENST00000557548 323 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AC093227.2-201ENST00000589357 285 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AC073539.2-201ENST00000597113 165 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AL121757.2-201ENST00000611223 313 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AL713922.2-201ENST00000619384 716 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 MIR1302-1-201ENST00000637932 143 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 AC007785.2-201ENST00000598627 1916 ntBASIC3.8□□□□□ -1.8
CLPTM1LQ96KA5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 RNU4-79P-201ENST00000362764 141 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 Y_RNA.474-201ENST00000384341 102 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 RNU6-1197P-201ENST00000391183 107 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 U3.42-201ENST00000408746 214 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 AC002075.2-201ENST00000425207 252 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 HMGB1P37-201ENST00000439613 609 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 RPL7P43-201ENST00000478876 753 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 KC877373.1-201ENST00000479066 408 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 TRBV12-2-201ENST00000489763 344 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 RN7SKP83-201ENST00000516512 178 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 RNU6-256P-201ENST00000516747 97 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 AP003122.3-201ENST00000526316 255 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 AC084851.1-201ENST00000529105 249 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 AL355375.2-201ENST00000574825 175 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 MIR4284-201ENST00000578924 81 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 MIR3672-201ENST00000584290 82 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 MIR5684-201ENST00000585074 65 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 FAM27D1-201ENST00000612308 341 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 AC006026.1-201ENST00000444025 1803 ntBASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1LQ96KA5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLPTM1LQ96KA5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms