Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.51□□□□□ -2.01
USP47Q96K76 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.51□□□□□ -2.01
USP47Q96K76 BX322784.1-201ENST00000455793 1077 ntBASIC2.51□□□□□ -2.01
USP47Q96K76 RNY4P37-201ENST00000516225 96 ntBASIC2.51□□□□□ -2.01
USP47Q96K76 MTCO1P47-201ENST00000523889 1271 ntBASIC2.51□□□□□ -2.01
USP47Q96K76 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.51□□□□□ -2.01
USP47Q96K76 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.51□□□□□ -2.01
USP47Q96K76 AC010678.1-201ENST00000614118 713 ntBASIC2.51□□□□□ -2.01
USP47Q96K76 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
USP47Q96K76 AL079343.1-201ENST00000572358 1771 ntBASIC2.51□□□□□ -2.01
USP47Q96K76 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
USP47Q96K76 RNU5E-8P-201ENST00000363502 116 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 RNU4-51P-201ENST00000364206 140 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 Y_RNA.234-201ENST00000364409 97 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 RNU6-343P-201ENST00000364709 104 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 AL590084.1-201ENST00000407885 387 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.5□□□□□ -2.01
USP47Q96K76 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.5□□□□□ -2.01
USP47Q96K76 AC099548.1-201ENST00000421443 426 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 BX119904.4-201ENST00000424402 301 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 AC008850.1-201ENST00000427546 362 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 Z82205.1-201ENST00000428456 297 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.5□□□□□ -2.01
USP47Q96K76 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.5□□□□□ -2.01
USP47Q96K76 AC009296.1-201ENST00000443146 155 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 DDX3P2-201ENST00000446138 111 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 ARPC3P5-201ENST00000448802 534 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 AC097493.1-201ENST00000463958 372 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 MTND4LP3-201ENST00000468320 276 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.5□□□□□ -2.01
USP47Q96K76 AC006499.2-201ENST00000513470 337 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 SCARNA15.2-201ENST00000516409 127 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 RNU6-714P-201ENST00000516963 103 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 AC124947.2-202ENST00000552735 133 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.5□□□□□ -2.01
USP47Q96K76 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.5□□□□□ -2.01
USP47Q96K76 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.5□□□□□ -2.01
USP47Q96K76 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.5□□□□□ -2.01
USP47Q96K76 AL357080.1-201ENST00000617394 239 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 AC073308.1-201ENST00000623696 305 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USP47Q96K76 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.5□□□□□ -2.01
USP47Q96K76 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USP47Q96K76 AL049641.1-201ENST00000441055 1948 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
USP47Q96K76 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USP47Q96K76 AC138915.1-201ENST00000565427 1685 ntBASIC2.5□□□□□ -2.01
USP47Q96K76 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USP47Q96K76 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
USP47Q96K76 RNA5SP270-201ENST00000411361 118 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 RPL23AP39-201ENST00000415533 405 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 Z85995.1-201ENST00000415547 335 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 BTF3P4-201ENST00000418852 495 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.49□□□□□ -2.01
USP47Q96K76 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.49□□□□□ -2.01
USP47Q96K76 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.49□□□□□ -2.01
USP47Q96K76 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.49□□□□□ -2.01
USP47Q96K76 SNORD121B-201ENST00000458838 81 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 LARP1BP2-201ENST00000486594 519 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.49□□□□□ -2.01
USP47Q96K76 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.49□□□□□ -2.01
USP47Q96K76 AC008837.2-201ENST00000513076 418 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 RNU6-276P-201ENST00000516114 96 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 SNORA25.15-201ENST00000516487 89 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.49□□□□□ -2.01
USP47Q96K76 AC118942.1-201ENST00000529674 1035 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.49□□□□□ -2.01
USP47Q96K76 AL132857.1-201ENST00000555180 708 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.49□□□□□ -2.01
USP47Q96K76 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.49□□□□□ -2.01
USP47Q96K76 VN1R83P-201ENST00000595685 445 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 BBIP1P1-201ENST00000602999 279 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AC104763.3-201ENST00000613765 618 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AC004852.3-201ENST00000614131 326 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL603758.1-201ENST00000618654 241 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 UCA1.1-201ENST00000620952 75 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL138955.1-201ENST00000622881 1040 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.49□□□□□ -2.01
USP47Q96K76 RNU1-105P-201ENST00000363470 161 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 RNU6-1000P-201ENST00000391066 106 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 SUMO2P12-201ENST00000405924 140 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 RNA5SP489-201ENST00000410986 109 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.49□□□□□ -2.01
USP47Q96K76 TIMM9P2-201ENST00000419324 266 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.49□□□□□ -2.01
USP47Q96K76 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.49□□□□□ -2.01
USP47Q96K76 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.49□□□□□ -2.01
USP47Q96K76 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.49□□□□□ -2.01
USP47Q96K76 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.49□□□□□ -2.01
USP47Q96K76 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.49□□□□□ -2.01
USP47Q96K76 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.49□□□□□ -2.01
USP47Q96K76 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AP002748.2-201ENST00000528671 348 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.49□□□□□ -2.01
USP47Q96K76 MIR4255-201ENST00000579351 72 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.49□□□□□ -2.01
USP47Q96K76 AL670379.6-201ENST00000603753 252 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL670379.11-201ENST00000604059 253 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AL670379.10-201ENST00000604330 253 ntBASIC2.49□□□□□ -2.01
USP47Q96K76 AC008162.1-201ENST00000604718 254 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms