Protein–RNA interactions for Protein: Q96HJ3

CCDC34, Coiled-coil domain-containing protein 34, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34Q96HJ3 VN1R34P-201ENST00000447387 883 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 ST13P20-201ENST00000447996 1065 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 RPL31P3-201ENST00000458430 332 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 RPL21P41-201ENST00000459863 264 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 RPL37P6-201ENST00000460682 294 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC117440.1-201ENST00000474107 571 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC010424.1-201ENST00000506336 297 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC117522.2-201ENST00000510049 657 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 CDC42P4-201ENST00000510507 563 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 SNORA18.6-201ENST00000516792 115 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 RNA5SP291-201ENST00000517222 105 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 H3F3AP1-201ENST00000559984 334 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC068135.2-201ENST00000569293 1028 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 RSL24D1P11-201ENST00000591045 491 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AL137843.1-201ENST00000605078 385 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC135507.1-201ENST00000607214 561 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC006566.1-201ENST00000608943 513 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AL161734.1-201ENST00000609720 557 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AL359198.2-201ENST00000611836 194 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC025594.3-201ENST00000613068 790 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 MIR7112-201ENST00000616126 65 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AC026422.1-201ENST00000623961 452 ntBASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC34Q96HJ3 FAM35BP-202ENST00000497389 3337 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AC000403.1-201ENST00000613696 3585 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 SNORA38.1-201ENST00000364172 131 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 RNU6-512P-201ENST00000364438 103 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 SNORD115.1-201ENST00000391109 76 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AC099548.1-201ENST00000421443 426 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 RPL7P37-201ENST00000425095 738 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AL365496.1-201ENST00000426885 215 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 MTND6P13-201ENST00000443510 523 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 USP9YP29-201ENST00000445112 563 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AC020550.1-201ENST00000447385 163 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AL033528.1-201ENST00000453780 140 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 RPL12P25-201ENST00000455592 494 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 SNORA9.3-201ENST00000516383 129 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 RNA5SP471-201ENST00000516971 106 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 RNA5SP290-201ENST00000517133 127 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 PSMA2P1-201ENST00000526365 646 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AP002404.1-201ENST00000532005 451 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AC005771.1-201ENST00000585581 349 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 RN7SKP299-201ENST00000606679 301 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AC010678.1-201ENST00000614118 713 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 AL603839.4-201ENST00000624658 1005 ntBASIC3.29□□□□□ -1.88
CCDC34Q96HJ3 ASNSP3-201ENST00000451989 1306 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 Y_RNA.359-201ENST00000365498 102 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 AL365338.1-201ENST00000422282 858 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 AC022018.1-201ENST00000430685 241 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 ARPC3P1-201ENST00000437218 533 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 NEFMP1-201ENST00000443423 1006 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 MTCO1P19-201ENST00000443487 500 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 snoU109.1-201ENST00000459339 135 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 SEM1P1-201ENST00000506694 209 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 AC098799.2-201ENST00000509466 868 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 HMGB1P41-201ENST00000520234 440 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 MIR3913-1-201ENST00000577744 102 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 AC015871.2-201ENST00000603605 948 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 AC090582.1-201ENST00000636321 199 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 TEX21P-201ENST00000447107 1476 ntBASIC3.28□□□□□ -1.88
CCDC34Q96HJ3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.28□□□□□ -1.89
CCDC34Q96HJ3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.28□□□□□ -1.89
CCDC34Q96HJ3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC34Q96HJ3 AL049641.1-201ENST00000441055 1948 ntBASIC3.27□□□□□ -1.89
CCDC34Q96HJ3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC34Q96HJ3 SNORD56.2-201ENST00000363242 71 ntBASIC3.27□□□□□ -1.89
CCDC34Q96HJ3 U8.3-201ENST00000363321 132 ntBASIC3.27□□□□□ -1.89
CCDC34Q96HJ3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCDC34Q96HJ3 RNU6-741P-201ENST00000383889 107 ntBASIC3.27□□□□□ -1.89
CCDC34Q96HJ3 SNORA20.2-201ENST00000383922 131 ntBASIC3.27□□□□□ -1.89
CCDC34Q96HJ3 SNORD116-9-201ENST00000384000 95 ntBASIC3.27□□□□□ -1.89
CCDC34Q96HJ3 SNORD116-3-201ENST00000384287 95 ntBASIC3.27□□□□□ -1.89
CCDC34Q96HJ3 RNU6-39P-201ENST00000384344 107 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms