Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 NDUFS5P4-201ENST00000412983 318 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 AL139413.1-201ENST00000421309 217 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 USP9YP15-201ENST00000442391 422 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 Z96811.1-201ENST00000445880 108 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 RPL31P41-201ENST00000477967 372 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 AC010587.1-201ENST00000505809 469 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 SEM1P1-201ENST00000506694 209 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 SNORA31.3-201ENST00000516029 96 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 SNORA31.26-201ENST00000517250 137 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 AC007834.2-201ENST00000536310 343 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 AL845331.3-202ENST00000562856 261 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 MIR3915-201ENST00000578518 97 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 AL355598.1-201ENST00000604169 202 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 AC007363.1-201ENST00000604736 620 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 AC013412.1-201ENST00000610687 192 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 AC013562.2-201ENST00000611632 603 ntBASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SNRNP40Q96DI7 AC009487.2-201ENST00000420969 6821 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 MTND4P4-201ENST00000439033 1366 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 SNORD116-8-201ENST00000384365 95 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 SNORD67-201ENST00000390833 111 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 RNU6-817P-201ENST00000391083 104 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 RNU2-49P-201ENST00000410666 184 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 RNU2-8P-201ENST00000410727 190 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 RPL7P37-201ENST00000425095 738 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 HMGB1P9-201ENST00000429856 646 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 BX679664.1-201ENST00000434429 253 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AL135938.1-201ENST00000443141 297 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 WASF1P1-201ENST00000447560 1131 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 MRPS36P2-201ENST00000512569 299 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 RNU6-677P-201ENST00000516914 101 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 RNU6-1092P-201ENST00000516955 87 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 MTND2P38-201ENST00000522536 667 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AP003181.2-201ENST00000528941 181 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AC109446.2-201ENST00000567872 497 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AC138749.5-201ENST00000611461 208 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 DUSP12P1-201ENST00000612874 516 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AC011939.3-201ENST00000613686 466 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AC116165.2-201ENST00000616705 206 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AC104010.1-201ENST00000616889 150 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 MIR3199-2-201ENST00000636243 86 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 AC138915.1-201ENST00000565427 1685 ntBASIC2.78□□□□□ -1.96
SNRNP40Q96DI7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.97
SNRNP40Q96DI7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.97
SNRNP40Q96DI7 AL136360.1-201ENST00000503377 1900 ntBASIC2.78□□□□□ -1.97
SNRNP40Q96DI7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 RNU1-75P-201ENST00000347264 129 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 RNU6-511P-201ENST00000363496 107 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 RNY1P12-201ENST00000364251 105 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 RNU1-73P-201ENST00000383971 164 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 RPL26P27-201ENST00000414397 437 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 ELOCP4-201ENST00000420090 333 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 AC098614.2-201ENST00000426040 255 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 AC104332.2-201ENST00000429959 156 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 RPL32P28-201ENST00000443577 397 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 AC093899.1-201ENST00000457984 376 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms