Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 USP9YP12-201ENST00000450481 570 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 FABP5P15-201ENST00000453566 214 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 snoU13.28-201ENST00000459235 104 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 RBM43P1-201ENST00000476891 1081 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC026801.1-201ENST00000497178 464 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 RNU6-390P-201ENST00000516259 103 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 RNU1-104P-201ENST00000517280 175 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AP003122.4-201ENST00000530980 758 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AL359212.1-201ENST00000556608 614 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AL391261.3-201ENST00000557194 520 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC010620.2-201ENST00000600135 313 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AL358072.1-201ENST00000604156 575 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AL161798.1-201ENST00000604630 131 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC005046.1-201ENST00000608515 625 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC069200.1-201ENST00000609511 323 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC027807.2-201ENST00000616099 408 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC012314.7-201ENST00000619693 93 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 FRG1KP-201ENST00000623592 341 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC073308.1-201ENST00000623696 305 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 U2.21-201ENST00000637295 81 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 AC135776.4-201ENST00000624300 1904 ntBASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPUSD4Q96CM3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 HSPE1P11-201ENST00000339579 310 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 SNORA63.1-201ENST00000362493 131 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 RNU6-1167P-201ENST00000363227 94 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 Y_RNA.169-201ENST00000363745 96 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 RNA5SP267-201ENST00000364893 126 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 RNU6-14P-201ENST00000384630 106 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 MIR627-201ENST00000384979 97 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 MTCYBP36-201ENST00000404146 440 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 NDUFS5P1-201ENST00000405668 289 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AC080125.1-201ENST00000414888 684 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 SEPT2P1-201ENST00000419651 180 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AL158156.1-201ENST00000422509 473 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 RAC1P6-201ENST00000423911 575 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AL356583.2-201ENST00000426536 280 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 MTND1P28-201ENST00000435623 950 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 COX6CP12-201ENST00000446748 202 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AC117440.1-201ENST00000474107 571 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 RN7SL432P-201ENST00000484057 298 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 RNU2-10P-201ENST00000516375 211 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 SNORA31.11-201ENST00000516528 139 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 SUB1P1-201ENST00000524415 382 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AC011979.2-201ENST00000527568 352 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AC068135.2-201ENST00000569293 1028 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AC174048.1-201ENST00000603389 144 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AC107294.1-201ENST00000609524 467 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 CR381653.2-201ENST00000624041 768 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AC068057.2-201ENST00000624047 895 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AC068880.5-201ENST00000624331 290 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AL603839.4-201ENST00000624658 1005 ntBASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.21□□□□□ -2.06
RPUSD4Q96CM3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 RNU6-960P-201ENST00000364056 120 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 SNORA71.1-201ENST00000364523 117 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 SNORA67.1-201ENST00000364749 141 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 RNY4P16-201ENST00000364768 94 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 RNU5E-6P-201ENST00000365574 115 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 FCF1P10-201ENST00000407590 479 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 Y_RNA.598-201ENST00000410480 95 ntBASIC2.2□□□□□ -2.06
RPUSD4Q96CM3 AC007919.1-201ENST00000429380 217 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms