Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TTC28Q96AY4 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 RNY4P3-201ENST00000365254 95 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 Y_RNA.457-201ENST00000384237 111 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 MIR493-201ENST00000385254 89 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
TTC28Q96AY4 MIR1285-1-201ENST00000408593 84 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC096632.1-201ENST00000427395 310 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 Z96811.1-201ENST00000445880 108 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 Y_RNA.644-201ENST00000459006 113 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC016065.2-201ENST00000514530 444 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 SNORA31.8-201ENST00000516327 108 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC092470.1-201ENST00000546187 132 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC012443.1-201ENST00000605605 231 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.95□□□□□ -2.26
TTC28Q96AY4 AC110079.1-202ENST00000635213 138 ntBASIC0.95□□□□□ -2.26
TTC28Q96AY4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 RNU6-173P-201ENST00000364215 104 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 RNU6-48P-201ENST00000384161 107 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 RNU6-31P-201ENST00000384388 108 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 SNORA1.3-201ENST00000384676 136 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 MIR329-2-201ENST00000385029 84 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 MTATP6P31-201ENST00000406985 692 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 MTCO3P4-201ENST00000419236 787 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 RPS26P56-201ENST00000444468 240 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 UBBP3-201ENST00000445497 241 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 RPL31P58-201ENST00000469001 379 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 AC087879.1-201ENST00000474343 374 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 AC114322.1-201ENST00000506771 926 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 AP004607.1-201ENST00000524456 203 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 DEFB108E-201ENST00000524692 240 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 POLR2KP1-201ENST00000553226 168 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 AL138976.2-201ENST00000563989 694 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 AC092140.2-201ENST00000618027 521 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 ZNF519P1-201ENST00000449011 1626 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 AC006548.1-201ENST00000427470 102 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 RABEPKP1-201ENST00000440529 1026 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 AC008379.1-201ENST00000463655 464 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 RNA5SP364-201ENST00000516938 78 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 AC112503.2-201ENST00000609005 552 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 MIR6840-201ENST00000611937 71 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 AC093838.1-201ENST00000613014 469 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 AC018755.4-201ENST00000619715 454 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 AP006248.3-201ENST00000623580 594 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 CR381572.1-201ENST00000625098 102 ntBASIC0.94□□□□□ -2.26
TTC28Q96AY4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.94□□□□□ -2.26
TTC28Q96AY4 RNU6-1181P-201ENST00000384191 106 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 RNU6-1197P-201ENST00000391183 107 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 MIR1912-201ENST00000410389 80 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 RPL21P32-201ENST00000419877 477 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 AL606495.1-201ENST00000422100 813 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 RPL31P63-201ENST00000422565 375 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TTC28Q96AY4 AL121601.2-201ENST00000438019 707 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 AL391261.3-201ENST00000557194 520 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 AC008739.2-201ENST00000597006 317 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 AC007275.1-201ENST00000621243 671 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 AC068620.4-201ENST00000636730 1182 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 AL354685.2-201ENST00000448218 1447 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TTC28Q96AY4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
TTC28Q96AY4 RNU4-52P-201ENST00000384209 138 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 MIR1250-201ENST00000408098 113 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 AL591704.2-201ENST00000421658 181 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 MRPL42P6-201ENST00000486397 371 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
TTC28Q96AY4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 OR5AQ1P-201ENST00000527596 927 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.93□□□□□ -2.26
TTC28Q96AY4 AL049870.4-201ENST00000555741 486 ntBASIC0.93□□□□□ -2.26
TTC28Q96AY4 AC023158.1-201ENST00000561632 1025 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms