Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RN7SL807P-201ENST00000470923 297 ntBASIC4.46□□□□□ -1.7
RTF1Q92541 RPL23AP11-201ENST00000475260 469 ntBASIC4.46□□□□□ -1.7
RTF1Q92541 AC091885.1-201ENST00000506658 268 ntBASIC4.46□□□□□ -1.7
RTF1Q92541 FGF7P4-201ENST00000509595 295 ntBASIC4.46□□□□□ -1.7
RTF1Q92541 RNA5SP309-201ENST00000516670 106 ntBASIC4.46□□□□□ -1.7
RTF1Q92541 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.46□□□□□ -1.7
RTF1Q92541 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RTF1Q92541 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.46□□□□□ -1.7
RTF1Q92541 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.46□□□□□ -1.7
RTF1Q92541 MIR4276-201ENST00000584832 70 ntBASIC4.46□□□□□ -1.7
RTF1Q92541 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.46□□□□□ -1.7
RTF1Q92541 VN1R80P-201ENST00000597126 338 ntBASIC4.46□□□□□ -1.7
RTF1Q92541 AL353621.2-201ENST00000605340 133 ntBASIC4.46□□□□□ -1.7
RTF1Q92541 AC010133.1-201ENST00000615809 842 ntBASIC4.46□□□□□ -1.7
RTF1Q92541 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.46□□□□□ -1.7
RTF1Q92541 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTF1Q92541 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTF1Q92541 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.46□□□□□ -1.7
RTF1Q92541 AL137003.2-201ENST00000606924 2538 ntBASIC4.46□□□□□ -1.7
RTF1Q92541 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
RTF1Q92541 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RTF1Q92541 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTF1Q92541 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTF1Q92541 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
RTF1Q92541 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
RTF1Q92541 RNU6-552P-201ENST00000362869 119 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 Y_RNA.231-201ENST00000364358 102 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 SNORA9-201ENST00000384215 133 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 Y_RNA.509-201ENST00000384506 99 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 MIR514A2-201ENST00000385131 88 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 MIR514A3-201ENST00000385132 88 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 SNORD37.1-201ENST00000390968 65 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.45□□□□□ -1.7
RTF1Q92541 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.45□□□□□ -1.7
RTF1Q92541 EEF1A1P40-201ENST00000412883 573 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.45□□□□□ -1.7
RTF1Q92541 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.45□□□□□ -1.7
RTF1Q92541 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.45□□□□□ -1.7
RTF1Q92541 RPL7P12-201ENST00000446719 750 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 MTND3P16-201ENST00000452205 344 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.45□□□□□ -1.7
RTF1Q92541 HMGN2P26-201ENST00000463169 339 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AC008481.1-201ENST00000463278 396 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AC092436.1-201ENST00000506450 503 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTF1Q92541 SNORA70.14-201ENST00000516205 110 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 RNA5SP503-201ENST00000517047 117 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 OR5AL2P-201ENST00000532185 920 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AC243972.3-201ENST00000539655 198 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AC023050.3-201ENST00000541142 333 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.45□□□□□ -1.7
RTF1Q92541 MIR4703-201ENST00000577728 79 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AC024619.4-201ENST00000580924 316 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AC067852.3-201ENST00000589177 561 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.45□□□□□ -1.7
RTF1Q92541 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.45□□□□□ -1.7
RTF1Q92541 AL670379.6-201ENST00000603753 252 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AL670379.11-201ENST00000604059 253 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AC008162.1-201ENST00000604718 254 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AL670379.1-201ENST00000604752 252 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AL670379.5-201ENST00000605253 252 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AL670379.12-201ENST00000605291 253 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AL670379.8-201ENST00000605353 252 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AL670379.7-201ENST00000605823 252 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AL121757.2-201ENST00000611223 313 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AC022149.2-201ENST00000621061 203 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 AC006065.5-201ENST00000623427 349 ntBASIC4.45□□□□□ -1.7
RTF1Q92541 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTF1Q92541 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.45□□□□□ -1.7
RTF1Q92541 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTF1Q92541 AL356274.2-201ENST00000624379 3752 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTF1Q92541 Z83843.1-201ENST00000604070 3685 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RTF1Q92541 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.44□□□□□ -1.7
RTF1Q92541 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTF1Q92541 TAB3P1-202ENST00000452645 1634 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 SNORD81.2-201ENST00000365153 76 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 Y_RNA.356-201ENST00000365475 113 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 RNU6-1029P-201ENST00000384109 107 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 RNU6-510P-201ENST00000391239 108 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 AL359634.1-202ENST00000404721 284 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 RN7SKP32-201ENST00000410167 303 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 RNU2-43P-201ENST00000410306 190 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 RHEBP3-201ENST00000411920 351 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 PDCL2P1-201ENST00000419302 352 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.44□□□□□ -1.7
RTF1Q92541 RAC1P6-201ENST00000423911 575 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 RPL35AP12-201ENST00000425362 338 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.44□□□□□ -1.7
RTF1Q92541 ERLEC1P1-201ENST00000433806 578 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.44□□□□□ -1.7
RTF1Q92541 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.44□□□□□ -1.7
RTF1Q92541 RN7SL432P-201ENST00000484057 298 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.44□□□□□ -1.7
RTF1Q92541 AC004062.1-201ENST00000509926 645 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 APOOP4-201ENST00000513530 597 ntBASIC4.44□□□□□ -1.7
RTF1Q92541 SNORA70.19-201ENST00000516717 90 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms