Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ELF2P3-201ENST00000445099 1506 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 AC068533.2-201ENST00000411872 306 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 NDUFS5P4-201ENST00000412983 318 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 AL161449.1-201ENST00000414531 1199 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 AL035407.1-201ENST00000429211 571 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 SDR42E1P3-201ENST00000438345 502 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 RPL21P134-201ENST00000453468 483 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 RPL18AP17-201ENST00000455326 198 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 RNU7-136P-201ENST00000458819 69 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 AC107032.1-201ENST00000485945 480 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 OR5AQ1P-201ENST00000527596 927 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 AP003497.1-201ENST00000528472 562 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 CBX3P7-201ENST00000532876 502 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 NACAP3-201ENST00000552100 481 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 MIR4765-201ENST00000585007 77 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 AL353997.4-201ENST00000586196 166 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 AC244517.12-201ENST00000623581 663 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 AP003485.1-201ENST00000625093 753 ntBASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLHC1Q8NHS4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2□□□□□ -2.09
CLHC1Q8NHS4 OR56A5-201ENST00000340110 738 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLHC1Q8NHS4 RNU6-637P-201ENST00000384050 107 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLHC1Q8NHS4 AL512604.1-201ENST00000404812 257 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 SNORA11.4-201ENST00000408823 129 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 RNU4-53P-201ENST00000410828 140 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2□□□□□ -2.09
CLHC1Q8NHS4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2□□□□□ -2.09
CLHC1Q8NHS4 ZNF736P7Y-201ENST00000425158 820 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2□□□□□ -2.09
CLHC1Q8NHS4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2□□□□□ -2.09
CLHC1Q8NHS4 USP9YP8-201ENST00000441913 500 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2□□□□□ -2.09
CLHC1Q8NHS4 AF213884.2-201ENST00000510417 903 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLHC1Q8NHS4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2□□□□□ -2.09
CLHC1Q8NHS4 AL136520.1-202ENST00000555494 763 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 MTATP6P2-201ENST00000603319 678 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 AC024257.5-201ENST00000612739 531 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 AC104763.3-201ENST00000613765 618 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 AC010378.1-201ENST00000619270 362 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 MIR6873-201ENST00000622788 63 ntBASIC2□□□□□ -2.09
CLHC1Q8NHS4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2□□□□□ -2.09
CLHC1Q8NHS4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2□□□□□ -2.09
CLHC1Q8NHS4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CLHC1Q8NHS4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CLHC1Q8NHS4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 AL138713.1-201ENST00000624026 2130 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 RNU6-1078P-201ENST00000364522 103 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 RNA5SP138-201ENST00000365098 114 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 SNORA23-201ENST00000365128 182 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 RNU6-1122P-201ENST00000384449 107 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 RNU6-952P-201ENST00000391164 108 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 RNU6-754P-201ENST00000391166 107 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 RSL24D1P4-201ENST00000400938 484 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 AL451054.2-201ENST00000420896 202 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 AC013262.1-201ENST00000426710 252 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 MTCO1P42-201ENST00000457379 726 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 TRBV1-201ENST00000476502 284 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 HMGB1P36-201ENST00000487709 576 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 RPS27AP10-201ENST00000496103 208 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 RNU6-1028P-201ENST00000517164 93 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 AC087894.1-201ENST00000538359 518 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 MIR3126-201ENST00000577443 74 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 MIR4448-201ENST00000584360 86 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 AL109918.3-201ENST00000603072 338 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 AL079343.1-201ENST00000572358 1771 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 AC008555.8-201ENST00000623602 2168 ntBASIC1.99□□□□□ -2.09
CLHC1Q8NHS4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLHC1Q8NHS4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CLHC1Q8NHS4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLHC1Q8NHS4 HSPE1P11-201ENST00000339579 310 ntBASIC1.98□□□□□ -2.09
CLHC1Q8NHS4 Y_RNA.110-201ENST00000363220 99 ntBASIC1.98□□□□□ -2.09
CLHC1Q8NHS4 GSTA9P-201ENST00000406231 611 ntBASIC1.98□□□□□ -2.09
CLHC1Q8NHS4 CCNG1P1-201ENST00000406783 885 ntBASIC1.98□□□□□ -2.09
CLHC1Q8NHS4 MTND1P21-201ENST00000412991 285 ntBASIC1.98□□□□□ -2.09
CLHC1Q8NHS4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.98□□□□□ -2.09
CLHC1Q8NHS4 MRPS36P1-201ENST00000421291 307 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms