Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FO393415.2-201ENST00000480085 343 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 AC022493.1-201ENST00000492984 337 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 VN1R104P-201ENST00000505115 1009 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 APOOP4-201ENST00000513530 597 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 SNORA25.11-201ENST00000515935 105 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 RNU1-86P-201ENST00000516108 154 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 RNU1-107P-201ENST00000516617 154 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 AC006600.1-201ENST00000572529 153 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 CPDP1-201ENST00000579660 283 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 MIR4270-201ENST00000581799 70 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 MIR3128-201ENST00000581957 66 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 AC234771.5-201ENST00000600161 514 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 RMST_4.1-201ENST00000616886 107 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 AC141273.2-201ENST00000618989 130 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 AC103858.2-201ENST00000621471 543 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 Z99571.1-201ENST00000636677 394 ntBASIC4.23□□□□□ -1.73
NUP43Q8NFH3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NUP43Q8NFH3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 CPHL1P-201ENST00000461341 3407 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 Y_RNA.14-201ENST00000362415 103 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 RNVU1-6-201ENST00000364688 164 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 SNORA62-201ENST00000365493 153 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 RNU6-209P-201ENST00000384118 107 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 Y_RNA.562-201ENST00000384695 113 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AC009237.10-201ENST00000414112 510 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AL590139.1-201ENST00000416267 400 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AL592045.1-201ENST00000429867 352 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 HSPD1P21-201ENST00000436541 245 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 FCF1P4-201ENST00000448326 183 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AC012671.1-201ENST00000451912 203 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AC133473.1-201ENST00000455173 299 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AC010326.1-201ENST00000462726 602 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 RN7SL41P-201ENST00000476144 297 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 RN7SL817P-201ENST00000480777 288 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AC069499.1-201ENST00000489433 509 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 ACA59.1-201ENST00000515966 143 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 RNU6-1023P-201ENST00000516137 106 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 RNA5SP464-201ENST00000516251 108 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 Y_RNA.687-201ENST00000516558 91 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 RNU7-4P-201ENST00000516961 62 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AC007375.1-201ENST00000554513 578 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 MIR4273-201ENST00000582824 84 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AL158827.2-201ENST00000602494 330 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 BPIFA4P-203ENST00000603168 689 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 MIR3976-201ENST00000606807 139 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AL691447.3-201ENST00000635020 330 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 AL049555.1-201ENST00000562834 1933 ntBASIC4.22□□□□□ -1.73
NUP43Q8NFH3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.22□□□□□ -1.73
NUP43Q8NFH3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NUP43Q8NFH3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NUP43Q8NFH3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP43Q8NFH3 UBE2L2-201ENST00000254302 429 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 Y_RNA.64-201ENST00000362845 102 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 Y_RNA.518-201ENST00000384552 113 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 RNU6-1179P-201ENST00000384667 107 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 RNA5SP372-201ENST00000390836 115 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 RNA5SP397-201ENST00000391323 118 ntBASIC4.21□□□□□ -1.74
NUP43Q8NFH3 MTND2P29-201ENST00000438595 412 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms