Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-188P-201ENST00000364207 107 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-1078P-201ENST00000364522 103 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.422-201ENST00000384054 114 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 SNORA48.2-201ENST00000390926 124 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-278P-201ENST00000390945 109 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 MIR548F5-201ENST00000408421 86 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 RNA5SP107-201ENST00000411358 122 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 BX276092.4-201ENST00000452056 248 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 HMGB3P21-201ENST00000452483 547 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 SNRPFP3-201ENST00000457792 225 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 HMGB1P25-201ENST00000468402 607 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AL163540.1-201ENST00000485382 386 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AC135721.1-201ENST00000497954 479 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 SNORD116-26-201ENST00000516006 96 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.682-201ENST00000516457 100 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 RN7SKP277-201ENST00000516895 283 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 IGKV2D-36-201ENST00000518643 226 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AL137161.1-201ENST00000532231 390 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 APOOP3-201ENST00000536787 586 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AC107016.1-201ENST00000550463 337 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AC084781.2-201ENST00000615568 161 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AC025034.2-201ENST00000623264 286 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 SAGE2P-201ENST00000420011 2126 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AP001350.1-201ENST00000601906 1524 ntBASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
SLC44A3Q8N4M1 AC103710.2-202ENST00000641454 2853 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.145-201ENST00000363527 102 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.202-201ENST00000364083 110 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.576-201ENST00000384781 102 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 SOD2P1-201ENST00000396543 562 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC114491.1-201ENST00000416095 246 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC010655.1-201ENST00000449336 292 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AL645939.1-201ENST00000453429 797 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 snoU109.4-201ENST00000458953 143 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 RN7SL585P-201ENST00000470538 280 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 RN7SL601P-201ENST00000471221 293 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 RPL7P43-201ENST00000478876 753 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 MTND4P7-201ENST00000523876 130 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC106782.4-201ENST00000568264 210 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC136443.5-201ENST00000603741 370 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC244517.1-201ENST00000606030 2086 ntBASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC44A3Q8N4M1 AC018555.1-201ENST00000567548 1980 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-989P-201ENST00000362756 107 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.144-201ENST00000363521 113 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-82P-201ENST00000363970 107 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-960P-201ENST00000364056 120 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 Y_RNA.212-201ENST00000364177 102 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AL133412.1-201ENST00000380194 2992 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-1013P-201ENST00000384180 107 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 RNU6-754P-201ENST00000391166 107 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 MTCYBP4-201ENST00000401524 249 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 RNA5SP239-201ENST00000410218 129 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 PMCHL1-202ENST00000423102 261 ntBASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC44A3Q8N4M1 CYCSP4-201ENST00000429682 331 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms