Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RN7SKP158-201ENST00000410453 326 ntBASIC1.47□□□□□ -2.17
VPS8Q8N3P4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS8Q8N3P4 EZH2P1-201ENST00000431167 291 ntBASIC1.47□□□□□ -2.17
VPS8Q8N3P4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS8Q8N3P4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS8Q8N3P4 AL121769.1-201ENST00000469473 401 ntBASIC1.47□□□□□ -2.17
VPS8Q8N3P4 OR52A4P-202ENST00000481634 799 ntBASIC1.47□□□□□ -2.17
VPS8Q8N3P4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS8Q8N3P4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS8Q8N3P4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS8Q8N3P4 DUXAP5-201ENST00000529668 529 ntBASIC1.47□□□□□ -2.17
VPS8Q8N3P4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.47□□□□□ -2.17
VPS8Q8N3P4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS8Q8N3P4 MIR3973-201ENST00000579824 107 ntBASIC1.47□□□□□ -2.17
VPS8Q8N3P4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS8Q8N3P4 AL078603.1-201ENST00000603824 313 ntBASIC1.47□□□□□ -2.17
VPS8Q8N3P4 AC109454.4-201ENST00000623411 649 ntBASIC1.47□□□□□ -2.17
VPS8Q8N3P4 AL513185.3-201ENST00000433335 1300 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 SNORA18.2-201ENST00000383865 132 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 RNU6-1-201ENST00000383898 107 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 RNU6-42P-201ENST00000384165 107 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 RNU6-36P-201ENST00000384172 107 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 RNU6-4P-201ENST00000384205 107 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 RNU6-5P-201ENST00000384238 107 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 RNU6-3P-201ENST00000384314 107 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 RNU6-2-201ENST00000384627 107 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 RNU6-9-201ENST00000384776 107 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 RNU6-33P-201ENST00000384793 107 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 RPS15AP38-201ENST00000413110 372 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 CYCSP48-201ENST00000417124 323 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 OFD1P18Y-201ENST00000420889 959 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS8Q8N3P4 KLF3P2-201ENST00000465138 268 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
VPS8Q8N3P4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.46□□□□□ -2.18
VPS8Q8N3P4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.46□□□□□ -2.18
VPS8Q8N3P4 AC118273.2-201ENST00000532092 465 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 MTCYBP23-201ENST00000558717 1102 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 AC008269.2-201ENST00000561915 1105 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 MIR4504-201ENST00000577413 92 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 MIR3199-1-201ENST00000582434 88 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 FAM71BP1-201ENST00000604431 523 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 RNU6-6P-201ENST00000606623 107 ntBASIC1.46□□□□□ -2.18
VPS8Q8N3P4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.46□□□□□ -2.18
VPS8Q8N3P4 TPTE2P4-201ENST00000258589 1605 ntBASIC1.45□□□□□ -2.18
VPS8Q8N3P4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS8Q8N3P4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS8Q8N3P4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
VPS8Q8N3P4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.45□□□□□ -2.18
VPS8Q8N3P4 RNA5SP276-201ENST00000362580 94 ntBASIC1.45□□□□□ -2.18
VPS8Q8N3P4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.45□□□□□ -2.18
VPS8Q8N3P4 AL078601.1-201ENST00000444542 271 ntBASIC1.45□□□□□ -2.18
VPS8Q8N3P4 AL034418.1-201ENST00000448675 860 ntBASIC1.45□□□□□ -2.18
VPS8Q8N3P4 RPL23AP3-201ENST00000453844 468 ntBASIC1.45□□□□□ -2.18
VPS8Q8N3P4 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS8Q8N3P4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS8Q8N3P4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.45□□□□□ -2.18
VPS8Q8N3P4 AP001960.1-201ENST00000506494 658 ntBASIC1.45□□□□□ -2.18
VPS8Q8N3P4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.45□□□□□ -2.18
VPS8Q8N3P4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.45□□□□□ -2.18
VPS8Q8N3P4 AC079148.1-201ENST00000565944 819 ntBASIC1.45□□□□□ -2.18
VPS8Q8N3P4 FAM60BP-201ENST00000578364 658 ntBASIC1.45□□□□□ -2.18
VPS8Q8N3P4 MIR4285-201ENST00000581001 85 ntBASIC1.45□□□□□ -2.18
VPS8Q8N3P4 AP006248.3-201ENST00000623580 594 ntBASIC1.45□□□□□ -2.18
VPS8Q8N3P4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VPS8Q8N3P4 AC006548.1-201ENST00000427470 102 ntBASIC1.44□□□□□ -2.18
VPS8Q8N3P4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS8Q8N3P4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.44□□□□□ -2.18
VPS8Q8N3P4 MTCYBP3-201ENST00000445588 1137 ntBASIC1.44□□□□□ -2.18
VPS8Q8N3P4 AC108059.3-201ENST00000456388 214 ntBASIC1.44□□□□□ -2.18
VPS8Q8N3P4 FABP5P5-201ENST00000515537 406 ntBASIC1.44□□□□□ -2.18
VPS8Q8N3P4 Y_RNA.670-201ENST00000516255 105 ntBASIC1.44□□□□□ -2.18
VPS8Q8N3P4 RNA5SP480-201ENST00000516840 109 ntBASIC1.44□□□□□ -2.18
VPS8Q8N3P4 AP005639.2-201ENST00000527592 928 ntBASIC1.44□□□□□ -2.18
VPS8Q8N3P4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.44□□□□□ -2.18
VPS8Q8N3P4 AC243960.4-201ENST00000600532 288 ntBASIC1.44□□□□□ -2.18
VPS8Q8N3P4 AC016727.2-201ENST00000603988 621 ntBASIC1.44□□□□□ -2.18
VPS8Q8N3P4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.44□□□□□ -2.18
VPS8Q8N3P4 CR381572.1-201ENST00000625098 102 ntBASIC1.44□□□□□ -2.18
VPS8Q8N3P4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VPS8Q8N3P4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.43□□□□□ -2.18
VPS8Q8N3P4 RNU6-19P-201ENST00000384718 107 ntBASIC1.43□□□□□ -2.18
VPS8Q8N3P4 UBE2V1P5-201ENST00000440070 405 ntBASIC1.43□□□□□ -2.18
VPS8Q8N3P4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS8Q8N3P4 RPL21P134-201ENST00000453468 483 ntBASIC1.43□□□□□ -2.18
VPS8Q8N3P4 Z82190.1-201ENST00000454534 490 ntBASIC1.43□□□□□ -2.18
VPS8Q8N3P4 AC107032.1-201ENST00000485945 480 ntBASIC1.43□□□□□ -2.18
VPS8Q8N3P4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.43□□□□□ -2.18
VPS8Q8N3P4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS8Q8N3P4 AC011604.1-201ENST00000545978 196 ntBASIC1.43□□□□□ -2.18
VPS8Q8N3P4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS8Q8N3P4 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS8Q8N3P4 AC003001.2-201ENST00000616294 831 ntBASIC1.43□□□□□ -2.18
VPS8Q8N3P4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VPS8Q8N3P4 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
VPS8Q8N3P4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
VPS8Q8N3P4 MIR126-201ENST00000362291 85 ntBASIC1.42□□□□□ -2.18
VPS8Q8N3P4 RNU6-220P-201ENST00000390919 107 ntBASIC1.42□□□□□ -2.18
VPS8Q8N3P4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS8Q8N3P4 RPL31P58-201ENST00000469001 379 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms