Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYNE4Q8N205 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC068647.1-201ENST00000489539 2265 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SYNE4Q8N205 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 RN7SKP111-201ENST00000410349 271 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 RNU2-15P-201ENST00000410692 191 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC004552.1-201ENST00000419089 348 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 PSMA2P3-201ENST00000429685 675 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 HMGB3P11-201ENST00000440127 604 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 RPL7P52-201ENST00000449200 742 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 AL590639.1-201ENST00000456484 337 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 PPP1R2P5-201ENST00000457256 603 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 RPL27AP5-201ENST00000469428 449 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC090543.2-201ENST00000483963 348 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 RNU6-1046P-201ENST00000516538 107 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 RNU6-410P-201ENST00000517006 107 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 FRG2DP-202ENST00000566967 323 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC007151.1-201ENST00000572774 483 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC060771.1-201ENST00000582031 164 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 POLR3GP2-201ENST00000588366 668 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 SNRPGP17-201ENST00000603780 214 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 AC093913.1-201ENST00000614178 329 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 MIR6715A-201ENST00000615929 79 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 AL159972.1-201ENST00000625150 448 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 MTND4P27-201ENST00000450813 1354 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYNE4Q8N205 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SYNE4Q8N205 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 MTCO1P24-201ENST00000515438 1558 ntBASIC4.23□□□□□ -1.73
SYNE4Q8N205 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.23□□□□□ -1.73
SYNE4Q8N205 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SYNE4Q8N205 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNE4Q8N205 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SYNE4Q8N205 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.22□□□□□ -1.73
SYNE4Q8N205 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.22□□□□□ -1.73
SYNE4Q8N205 PABPC1P7-201ENST00000413177 1513 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SYNE4Q8N205 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.22□□□□□ -1.73
SYNE4Q8N205 MIR448-201ENST00000362131 111 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 RNU5E-8P-201ENST00000363502 116 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 Y_RNA.146-201ENST00000363549 102 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 Y_RNA.315-201ENST00000365117 102 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SYNE4Q8N205 RN7SKP140-201ENST00000411196 284 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.22□□□□□ -1.73
SYNE4Q8N205 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.22□□□□□ -1.73
SYNE4Q8N205 EZH2P1-201ENST00000431167 291 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 OR4K11P-201ENST00000431829 904 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.22□□□□□ -1.73
SYNE4Q8N205 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.22□□□□□ -1.73
SYNE4Q8N205 AC010469.1-201ENST00000463864 576 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 MTCO2P29-201ENST00000465212 189 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.22□□□□□ -1.73
SYNE4Q8N205 AC005741.1-201ENST00000511094 432 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.22□□□□□ -1.73
SYNE4Q8N205 RNU6-27P-201ENST00000516146 107 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 SNORD27.1-201ENST00000516319 72 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 AP003497.1-201ENST00000528472 562 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 AP005435.4-201ENST00000529514 284 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.22□□□□□ -1.73
SYNE4Q8N205 OR4K8P-201ENST00000578842 1048 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 CTHRC1P1-201ENST00000605383 469 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 AC084781.2-201ENST00000615568 161 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 AC090971.5-201ENST00000621102 293 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 AL359757.2-201ENST00000624309 274 ntBASIC4.22□□□□□ -1.73
SYNE4Q8N205 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SYNE4Q8N205 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
SYNE4Q8N205 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.21□□□□□ -1.73
SYNE4Q8N205 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
SYNE4Q8N205 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SYNE4Q8N205 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SYNE4Q8N205 OR1S2-201ENST00000302592 978 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SYNE4Q8N205 RNA5SP258-201ENST00000362750 119 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 RNU6-989P-201ENST00000362756 107 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 RNY1P12-201ENST00000364251 105 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 RNU6-522P-201ENST00000364497 107 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 SNORA4.3-201ENST00000365564 137 ntBASIC4.21□□□□□ -1.74
SYNE4Q8N205 Y_RNA.387-201ENST00000383918 102 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms