Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC114797.1-201ENST00000514003 728 ntBASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 AC078814.3-201ENST00000553036 491 ntBASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 AC234778.2-201ENST00000566241 354 ntBASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 AC245884.10-201ENST00000597355 337 ntBASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 AC092953.2-201ENST00000608000 699 ntBASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 AC007038.2-201ENST00000608095 740 ntBASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 AC072039.2-201ENST00000608883 439 ntBASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 AC016597.2-201ENST00000613256 341 ntBASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 AL607023.1-201ENST00000620045 248 ntBASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 AC097655.1-201ENST00000635075 318 ntBASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC50Q8IVM0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 RNU6-223P-201ENST00000362830 107 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 RNA5SP68-201ENST00000363885 119 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 RNU6-769P-201ENST00000384407 104 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 RNU6-443P-201ENST00000384780 107 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 U3.26-201ENST00000391236 204 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AC007064.1-201ENST00000412238 351 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AL008987.1-201ENST00000415528 237 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 ELOCP30-201ENST00000447108 299 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AC020550.1-201ENST00000447385 163 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 OR6C5P-201ENST00000452388 923 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 CECR9-201ENST00000453421 199 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AC055855.1-201ENST00000489563 579 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 RNA5SP216-201ENST00000516111 123 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 RNA5SP290-201ENST00000517133 127 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AC105185.1-201ENST00000518705 535 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AC025281.1-201ENST00000567026 265 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AC105137.2-201ENST00000569073 466 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AL391001.1-201ENST00000602747 715 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AC079395.3-201ENST00000615161 484 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AC068057.2-201ENST00000624047 895 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AC103706.2-201ENST00000638080 240 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AC022336.2-201ENST00000568966 2538 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 MTND4P16-201ENST00000466108 1367 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 MTND4P1-201ENST00000457501 1466 ntBASIC2.45□□□□□ -2.02
CCDC50Q8IVM0 AL359693.1-201ENST00000614959 2407 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 RNU4-52P-201ENST00000384209 138 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 HMGB3P2-201ENST00000411913 584 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AP001486.1-201ENST00000463339 476 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AC107626.1-201ENST00000471084 183 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AC126389.1-201ENST00000477436 290 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AL160314.1-201ENST00000490836 438 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AC104685.1-201ENST00000502445 371 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AC105252.1-201ENST00000503089 286 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 MTND5P13-201ENST00000513046 1079 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 SCARNA17.1-201ENST00000516211 143 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 SCARNA17.2-201ENST00000516334 143 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 RNU6-64P-201ENST00000517119 105 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 RPL7P20-201ENST00000520308 745 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AC011458.1-201ENST00000604034 617 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AC004805.2-201ENST00000605382 482 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AL121917.1-203ENST00000605534 577 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AL355472.4-201ENST00000610233 626 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AC008498.1-201ENST00000613012 531 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 SCARNA17.4-201ENST00000614296 143 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 AC006927.4-201ENST00000639187 543 ntBASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC50Q8IVM0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 CCT4P2-201ENST00000233836 1548 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 FAM133CP-201ENST00000332869 704 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 RNA5SP88-201ENST00000365560 109 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms