Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ISCUP1-201ENST00000454451 448 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 ANP32BP2-201ENST00000454525 545 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 AC104564.1-201ENST00000493028 407 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 MIR2116-201ENST00000517221 80 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 MRPL49P2-201ENST00000521066 465 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 CYCSP29-201ENST00000533731 318 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 AC113195.1-201ENST00000579952 141 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 AC104695.3-201ENST00000604052 296 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 ELOCP5-201ENST00000604924 333 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 AC018462.2-201ENST00000605375 395 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 AL161423.1-201ENST00000613700 262 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 AC015813.6-201ENST00000624409 5808 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 RNU6-933P-201ENST00000384424 107 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 Y_RNA.512-201ENST00000384518 102 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 RNU4-70P-201ENST00000384579 139 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 RPS26P8-201ENST00000393490 348 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 RNU6-1050P-201ENST00000410388 107 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 Z99755.1-201ENST00000414048 380 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 AC007560.1-201ENST00000426912 237 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 AC004938.1-201ENST00000438468 308 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 UQCRHP4-201ENST00000471686 272 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 AC092436.3-201ENST00000511788 257 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 SNORA31.9-201ENST00000516429 84 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 AC025755.1-201ENST00000521306 278 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 AC104576.1-201ENST00000524225 88 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 CYCSP40-201ENST00000575927 294 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 MIR1254-2-201ENST00000579553 63 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 VN1R85P-201ENST00000601587 426 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 AC004805.2-201ENST00000605382 482 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 ZYXP1-201ENST00000617638 118 ntBASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NPAS4Q8IUM7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 Y_RNA.257-201ENST00000364596 102 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 RNU6-99P-201ENST00000364721 107 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 Y_RNA.404-201ENST00000383978 102 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 RNU4-61P-201ENST00000411243 107 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 RPL23AP26-201ENST00000412728 464 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 AC104333.2-201ENST00000422630 192 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 AC097713.2-201ENST00000430199 356 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 MYL8P-204ENST00000431574 518 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 AL356535.1-201ENST00000440335 398 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 AL078601.1-201ENST00000444542 271 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 RPS23P3-201ENST00000470993 430 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 AC104164.2-201ENST00000496953 495 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 RNU1-86P-201ENST00000516108 154 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 RNU1-107P-201ENST00000516617 154 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 SNORA31.19-201ENST00000517079 126 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 RNU6-699P-201ENST00000517081 110 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 AC005899.2-201ENST00000584353 90 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 U2.1-201ENST00000618978 145 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 AC100778.3-201ENST00000580060 1750 ntBASIC4.91□□□□□ -1.62
NPAS4Q8IUM7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
NPAS4Q8IUM7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NPAS4Q8IUM7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.9□□□□□ -1.62
NPAS4Q8IUM7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.9□□□□□ -1.62
NPAS4Q8IUM7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NPAS4Q8IUM7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
NPAS4Q8IUM7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPAS4Q8IUM7 SNORD14B-201ENST00000364533 90 ntBASIC4.9□□□□□ -1.63
NPAS4Q8IUM7 RNA5SP366-201ENST00000365454 123 ntBASIC4.9□□□□□ -1.63
NPAS4Q8IUM7 RNU6-140P-201ENST00000384566 108 ntBASIC4.9□□□□□ -1.63
NPAS4Q8IUM7 RPS20P14-201ENST00000412545 360 ntBASIC4.9□□□□□ -1.63
NPAS4Q8IUM7 AL096701.2-201ENST00000416920 238 ntBASIC4.9□□□□□ -1.63
NPAS4Q8IUM7 RPS15AP10-201ENST00000432472 382 ntBASIC4.9□□□□□ -1.63
NPAS4Q8IUM7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 426.6 ms