Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP48Q86UV5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP48Q86UV5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP48Q86UV5 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.96□□□□□ -1.61
USP48Q86UV5 HSPA8P4-201ENST00000511877 1920 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 Y_RNA.216-201ENST00000364205 93 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 SNORD42.2-201ENST00000365570 69 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP48Q86UV5 MIR30B-201ENST00000384850 88 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 MIR606-201ENST00000384851 96 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 RBMY1KP-201ENST00000423480 476 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 GPM6BP2-201ENST00000432046 144 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.96□□□□□ -1.62
USP48Q86UV5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.96□□□□□ -1.62
USP48Q86UV5 GPM6BP1-201ENST00000446387 144 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 AC008264.1-201ENST00000447612 367 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 FGF7P3-201ENST00000454645 303 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.96□□□□□ -1.62
USP48Q86UV5 HMGB3P30-201ENST00000457863 606 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 snoU13.4-201ENST00000458916 104 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 RPL37P6-201ENST00000460682 294 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 MTND4P17-201ENST00000470444 350 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 RPS29P19-201ENST00000479709 171 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 AC104164.2-201ENST00000496953 495 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 Y_RNA.682-201ENST00000516457 100 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 Vault.1-201ENST00000516474 102 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.96□□□□□ -1.62
USP48Q86UV5 ELOCP31-201ENST00000540463 467 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.96□□□□□ -1.62
USP48Q86UV5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.96□□□□□ -1.62
USP48Q86UV5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.96□□□□□ -1.62
USP48Q86UV5 DUSP12P1-201ENST00000612874 516 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 AC034102.8-201ENST00000615146 484 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 AC134503.1-201ENST00000633048 54 ntBASIC4.96□□□□□ -1.62
USP48Q86UV5 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
USP48Q86UV5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
USP48Q86UV5 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
USP48Q86UV5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP48Q86UV5 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.95□□□□□ -1.62
USP48Q86UV5 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USP48Q86UV5 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.95□□□□□ -1.62
USP48Q86UV5 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
USP48Q86UV5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP48Q86UV5 MIR34B-201ENST00000385076 84 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 MIR514A1-201ENST00000385133 98 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 Y_RNA.579-201ENST00000390939 94 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.95□□□□□ -1.62
USP48Q86UV5 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.95□□□□□ -1.62
USP48Q86UV5 GTF2IP13-201ENST00000438487 386 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 Y_RNA.635-201ENST00000459041 101 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.95□□□□□ -1.62
USP48Q86UV5 RPS26P15-201ENST00000488067 348 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.95□□□□□ -1.62
USP48Q86UV5 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.95□□□□□ -1.62
USP48Q86UV5 AC104136.1-201ENST00000512969 394 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.95□□□□□ -1.62
USP48Q86UV5 RNU2-69P-201ENST00000516061 100 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 RNU6-256P-201ENST00000516747 97 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 AC026403.1-201ENST00000518938 295 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.95□□□□□ -1.62
USP48Q86UV5 AC006064.5-201ENST00000541782 248 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.95□□□□□ -1.62
USP48Q86UV5 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.95□□□□□ -1.62
USP48Q86UV5 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.95□□□□□ -1.62
USP48Q86UV5 MTCO3P23-201ENST00000561363 289 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 AC007151.1-201ENST00000572774 483 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 RPL23AP87-202ENST00000573039 466 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 MIR3921-201ENST00000577308 85 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
USP48Q86UV5 MIR3941-201ENST00000582572 103 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 AC002545.1-201ENST00000592511 181 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 ATP1B3P1-201ENST00000605365 821 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 MIR15A-201ENST00000607334 83 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 AL158196.1-201ENST00000616786 434 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 MIR7151-201ENST00000617477 60 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 AL034408.1-202ENST00000636088 415 ntBASIC4.95□□□□□ -1.62
USP48Q86UV5 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.95□□□□□ -1.62
USP48Q86UV5 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
USP48Q86UV5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USP48Q86UV5 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
USP48Q86UV5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.94□□□□□ -1.62
USP48Q86UV5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
USP48Q86UV5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP48Q86UV5 OR4G2P-202ENST00000641004 1759 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.94□□□□□ -1.62
USP48Q86UV5 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
USP48Q86UV5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
USP48Q86UV5 RNU6-254P-201ENST00000363377 107 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 SNORA7.2-201ENST00000364446 145 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 RNU6-43P-201ENST00000384302 107 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 RN7SKP156-201ENST00000410308 342 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 HSPE1P12-201ENST00000412576 301 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 RPLP0P7-201ENST00000416050 667 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 BX842559.1-201ENST00000419615 532 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.94□□□□□ -1.62
USP48Q86UV5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.94□□□□□ -1.62
USP48Q86UV5 AL669831.1-202ENST00000428504 417 ntBASIC4.94□□□□□ -1.62
USP48Q86UV5 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.94□□□□□ -1.62
USP48Q86UV5 BRK1P2-201ENST00000442875 223 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms