Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 HSPE1P11-201ENST00000339579 310 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 RNU6-1097P-201ENST00000363586 107 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 RNU6-173P-201ENST00000364215 104 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 SMIM11P1-201ENST00000369586 178 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 Y_RNA.402-201ENST00000383972 102 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 RNU6-701P-201ENST00000384059 107 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 MIR591-201ENST00000385290 95 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AP000567.1-201ENST00000406413 156 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 SYF2P2-201ENST00000417620 583 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC073063.1-201ENST00000434352 607 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 BNIP3P2-201ENST00000441221 577 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC233702.1-201ENST00000482905 502 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 SNORD27.1-201ENST00000516319 72 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 RNU1-95P-201ENST00000516357 160 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 RNU1-128P-201ENST00000516704 160 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 RNU6-410P-201ENST00000517006 107 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC100870.1-201ENST00000522035 505 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AP003034.1-201ENST00000534621 422 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AL359212.1-201ENST00000556608 614 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 MTCO3P24-201ENST00000572729 782 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 MIR548S-201ENST00000581352 82 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC007621.1-201ENST00000604544 437 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AL157817.1-201ENST00000614264 790 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AL121772.2-201ENST00000614331 297 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 SNHG22-203ENST00000617833 660 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 MIR1321-201ENST00000637766 79 ntBASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
LRRTM1Q86UE6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 RNU6-1120P-201ENST00000362988 108 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 Y_RNA.89-201ENST00000363031 102 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 RNU6-534P-201ENST00000364877 106 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 RNU5E-4P-201ENST00000364931 120 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 Y_RNA.453-201ENST00000384223 109 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 MIR554-201ENST00000384874 96 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 MIR1277-201ENST00000408536 78 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 RNU6-908P-201ENST00000410160 94 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 RN7SKP202-201ENST00000410439 330 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 BMS1P22-201ENST00000414726 313 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AL109913.1-201ENST00000421173 514 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 UBE2D3P2-201ENST00000424409 445 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 MED13P1-201ENST00000428342 171 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 TIMM9P3-201ENST00000428659 274 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 GTF2IP20-201ENST00000431663 360 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC000111.3-201ENST00000433478 193 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC106707.2-201ENST00000484182 374 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 RN7SKP43-201ENST00000516173 320 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 RNU6-390P-201ENST00000516259 103 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 RNU2-10P-201ENST00000516375 211 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 RNU7-51P-201ENST00000516560 62 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 RNU6-835P-201ENST00000516974 104 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 MTND1P35-201ENST00000526739 508 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC011979.2-201ENST00000527568 352 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 OR5B19P-201ENST00000531766 928 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 RPL21P12-201ENST00000559810 515 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 SNORA59B-202ENST00000578183 701 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 MIR2682-201ENST00000580305 110 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC006504.3-201ENST00000586818 523 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AL162713.1-201ENST00000604480 262 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC007363.1-201ENST00000604736 620 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms