Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RPL21P16-201ENST00000495531 483 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 FTH1P24-201ENST00000503502 462 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AC091868.1-201ENST00000508746 304 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 MIR4330-201ENST00000579077 105 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 MIR6864-201ENST00000617935 70 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 AC008725.1-201ENST00000605123 2263 ntBASIC4.31□□□□□ -1.72
ATG4DQ86TL0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATG4DQ86TL0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 AP001642.1-201ENST00000624727 2117 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 RPL9P7-201ENST00000330965 580 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 RNA5SP443-201ENST00000363083 132 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 Y_RNA.233-201ENST00000364407 101 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 Y_RNA.240-201ENST00000364469 95 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 SNORD20-201ENST00000384550 80 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 RNU6-417P-201ENST00000384712 107 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 RNU6-1135P-201ENST00000411083 103 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 AL591043.1-201ENST00000432461 424 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 AL513043.1-201ENST00000439124 535 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 RPS26P2-201ENST00000440331 348 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 RNU7-87P-201ENST00000459343 62 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 RPL9P9-202ENST00000466501 579 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 SCARNA22-201ENST00000503991 125 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 RPL23AP87-202ENST00000573039 466 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 MIR3667-201ENST00000581025 74 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 MIR4737-201ENST00000583979 81 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 AC098826.3-201ENST00000603823 466 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 BRDTP1-201ENST00000605735 677 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 Y_RNA.772-201ENST00000606692 102 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 AL365222.1-201ENST00000614661 98 ntBASIC4.3□□□□□ -1.72
ATG4DQ86TL0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.3□□□□□ -1.72
ATG4DQ86TL0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 Y_RNA.324-201ENST00000365165 102 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 RNU6-290P-201ENST00000365212 101 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 RNU1-82P-201ENST00000390851 165 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 RNU6-607P-201ENST00000411283 108 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 RPL19P1-201ENST00000411635 428 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 RPS11P1-201ENST00000451072 473 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AC079168.2-201ENST00000453977 416 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 COX6CP14-201ENST00000469580 174 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 RPS29P22-201ENST00000472363 168 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 RN7SL459P-201ENST00000481078 302 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AC074133.1-201ENST00000515696 183 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 SNRPGP16-201ENST00000533275 226 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AP001880.2-201ENST00000538233 448 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 EDDM3DP-201ENST00000554692 434 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 LRRC37A5P-203ENST00000580181 585 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AC011921.3-201ENST00000605540 361 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AC011476.5-201ENST00000615594 130 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 AC243829.7-201ENST00000633081 225 ntBASIC4.29□□□□□ -1.72
ATG4DQ86TL0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATG4DQ86TL0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms