Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 AL157394.1-201ENST00000562983 1224 ntBASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 WISP1-OT1-201ENST00000602893 642 ntBASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 AC019159.1-201ENST00000605094 187 ntBASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 MTND4LP5-201ENST00000605152 292 ntBASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 AL591516.1-201ENST00000611326 274 ntBASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 AC138749.5-201ENST00000611461 208 ntBASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 AC013562.2-201ENST00000611632 603 ntBASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 AL365204.3-201ENST00000612448 685 ntBASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 AC116165.2-201ENST00000616705 206 ntBASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 AC091953.2-201ENST00000623979 160 ntBASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 MIR622-201ENST00000638396 96 ntBASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 AC110491.1-201ENST00000562191 2010 ntBASIC2.8□□□□□ -1.96
NHLRC1Q6VVB1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 RNU6-960P-201ENST00000364056 120 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 RNU6-512P-201ENST00000364438 103 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 RNU1-73P-201ENST00000383971 164 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 SNORA46-201ENST00000384762 135 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 MIR1302-8-201ENST00000408342 128 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 Z92545.1-201ENST00000411782 234 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC245054.2-201ENST00000415639 319 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC104332.2-201ENST00000429959 156 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC010153.1-201ENST00000432862 727 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 Z96811.1-201ENST00000445880 108 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 UQCRHP3-201ENST00000451503 251 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 MTATP6P7-201ENST00000453315 681 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 KATNBL1P6-201ENST00000453433 915 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 FABP5P15-201ENST00000453566 214 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 RPL31P41-201ENST00000477967 372 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 SNORA31.26-201ENST00000517250 137 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC107934.1-201ENST00000522215 217 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 MIR5680-201ENST00000577577 84 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 MIR5004-201ENST00000579078 107 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 MIR3118-1-201ENST00000581787 76 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 MIR4506-201ENST00000584693 77 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 BNIP3P8-201ENST00000597863 560 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC108747.1-201ENST00000609508 535 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC009090.3-201ENST00000616553 565 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC078883.4-201ENST00000623218 367 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 AC091931.1-201ENST00000623488 728 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NHLRC1Q6VVB1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 AL035425.3-201ENST00000564206 4996 ntBASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 RNU6-511P-201ENST00000363496 107 ntBASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 RNU5E-6P-201ENST00000365574 115 ntBASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 GTF2IP20-201ENST00000431663 360 ntBASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 AL445567.1-201ENST00000439121 144 ntBASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 USP9YP15-201ENST00000442391 422 ntBASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 COX6CP12-201ENST00000446748 202 ntBASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 snoU109.1-201ENST00000459339 135 ntBASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 BET1P1-201ENST00000482276 359 ntBASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 AC109486.1-201ENST00000486833 374 ntBASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.78□□□□□ -1.96
NHLRC1Q6VVB1 AC091435.1-201ENST00000505442 584 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms