Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
ZNF549Q6P9A3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.301-201ENST00000364990 103 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 RNU6-339P-201ENST00000384310 107 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 SNORA70E-201ENST00000384492 135 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 SNORD17-201ENST00000390930 237 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 UBE2V1P2-201ENST00000397758 440 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 RNU2-36P-201ENST00000410361 191 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 Z99755.1-201ENST00000414048 380 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 NCOR1P3-201ENST00000420479 303 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AL353729.1-201ENST00000425044 720 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 BX276092.4-201ENST00000452056 248 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AL645939.1-201ENST00000453429 797 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 RBMY2UP-201ENST00000453474 324 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 MTND1P9-201ENST00000453775 944 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 RNU7-182P-201ENST00000459009 62 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 RNU7-59P-201ENST00000459101 61 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 HMGB1P25-201ENST00000468402 607 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 MTND4P17-201ENST00000470444 350 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC025518.1-201ENST00000479856 347 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 RPL21P99-201ENST00000480369 423 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC116562.3-201ENST00000506136 177 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 RN7SKP277-201ENST00000516895 283 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 RNU6-798P-201ENST00000516912 103 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 RN7SKP256-201ENST00000517201 314 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC011979.2-201ENST00000527568 352 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC068587.5-201ENST00000528506 175 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AL133271.1-201ENST00000538229 291 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 SETP7-201ENST00000552169 453 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC007566.2-201ENST00000603642 413 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AL360085.1-201ENST00000604713 532 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC103710.3-201ENST00000608157 948 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC004908.2-201ENST00000609090 574 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 TAB3P1-202ENST00000452645 1634 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 MTND5P3-201ENST00000438536 1800 ntBASIC3.4□□□□□ -1.87
ZNF549Q6P9A3 AC106871.1-201ENST00000568324 3102 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AL356274.2-201ENST00000624379 3752 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 SNORD42.2-201ENST00000365570 69 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AL359837.1-201ENST00000381357 287 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 RNU6-1029P-201ENST00000384109 107 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 BTF3L4P3-201ENST00000418879 476 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AL451054.2-201ENST00000420896 202 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 MTND2P23-201ENST00000422990 651 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AC005094.1-201ENST00000440420 368 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AL133547.1-201ENST00000448546 220 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AL162395.1-201ENST00000457882 422 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 SNORD108-201ENST00000459332 71 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 RPL23AP11-201ENST00000475260 469 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 RPL21P129-201ENST00000491732 478 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 CCDC34P1-201ENST00000507441 517 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 RNU6-64P-201ENST00000517119 105 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AP001804.3-201ENST00000525146 880 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AC109635.4-202ENST00000531666 412 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 OR5B10P-201ENST00000532869 642 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AC093249.1-201ENST00000567049 203 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 MIR4703-201ENST00000577728 79 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 MIR3922-201ENST00000585192 84 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 POLR3GP2-201ENST00000588366 668 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 CTHRC1P1-201ENST00000605383 469 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 AL162730.1-201ENST00000605734 292 ntBASIC3.39□□□□□ -1.87
ZNF549Q6P9A3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms