Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC006600.1-201ENST00000572529 153 ntBASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 AL109918.3-201ENST00000603072 338 ntBASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 MIR1244-1-201ENST00000612829 85 ntBASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 MIR1244-3-201ENST00000635744 85 ntBASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 MIR1244-2-201ENST00000636449 85 ntBASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 MIR1244-4-202ENST00000636813 85 ntBASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DQA1Q5Y7H0 AC087190.4-201ENST00000574616 8334 ntBASIC4.21□□□□□ -1.73
HLA-DQA1Q5Y7H0 AL139811.1-201ENST00000424779 2299 ntBASIC4.21□□□□□ -1.73
HLA-DQA1Q5Y7H0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.21□□□□□ -1.73
HLA-DQA1Q5Y7H0 AL049555.1-201ENST00000562834 1933 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AC125257.1-201ENST00000560400 2930 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 Y_RNA.26-201ENST00000362539 101 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-37P-201ENST00000362692 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 Y_RNA.214-201ENST00000364201 112 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-11P-201ENST00000364234 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-1317P-201ENST00000364582 104 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-7-201ENST00000364784 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 Y_RNA.288-201ENST00000364854 92 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-8-201ENST00000365467 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-25P-201ENST00000383873 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-1-201ENST00000383898 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-48P-201ENST00000384161 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-36P-201ENST00000384172 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-4P-201ENST00000384205 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-5P-201ENST00000384238 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-3P-201ENST00000384314 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-16P-201ENST00000384385 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-933P-201ENST00000384424 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-15P-201ENST00000384534 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 Y_RNA.533-201ENST00000384596 114 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-2-201ENST00000384627 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-29P-201ENST00000384637 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-9-201ENST00000384776 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-33P-201ENST00000384793 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 MIR514A1-201ENST00000385133 98 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 MIR301A-201ENST00000385261 86 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 MT-TW-201ENST00000387382 68 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 MIR921-201ENST00000401133 56 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 U3.42-201ENST00000408746 214 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RPS12P23-201ENST00000419579 400 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AC073910.1-201ENST00000445047 438 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AC073587.1-201ENST00000447093 876 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AC012671.1-201ENST00000451912 203 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 MTCO3P8-201ENST00000453691 755 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AC108022.1-201ENST00000493466 478 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNA5SP497-201ENST00000516081 97 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 Y_RNA.687-201ENST00000516558 91 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AC023157.2-201ENST00000540596 141 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 MIR4330-201ENST00000579077 105 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 CPDP1-201ENST00000579660 283 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 SNORD84-203ENST00000584275 78 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AL158827.2-201ENST00000602494 330 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNF138P2-201ENST00000603490 592 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AL161798.1-201ENST00000604630 131 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-6P-201ENST00000606623 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 RMST_4.1-201ENST00000616886 107 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 FP236240.3-201ENST00000623061 327 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AC091905.2-201ENST00000623143 306 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AL691447.3-201ENST00000635020 330 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 AC233263.6-201ENST00000631132 1963 ntBASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DQA1Q5Y7H0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQA1Q5Y7H0 MAPK10-304ENST00000641341 3984 ntBASIC4.2□□□□□ -1.74
HLA-DQA1Q5Y7H0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HLA-DQA1Q5Y7H0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DQA1Q5Y7H0 Y_RNA.33-201ENST00000362591 102 ntBASIC4.2□□□□□ -1.74
HLA-DQA1Q5Y7H0 RNU6-806P-201ENST00000365147 105 ntBASIC4.2□□□□□ -1.74
HLA-DQA1Q5Y7H0 Y_RNA.461-201ENST00000384263 103 ntBASIC4.2□□□□□ -1.74
HLA-DQA1Q5Y7H0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.2□□□□□ -1.74
HLA-DQA1Q5Y7H0 ELOCP20-201ENST00000422460 345 ntBASIC4.2□□□□□ -1.74
HLA-DQA1Q5Y7H0 Z74021.1-201ENST00000423610 407 ntBASIC4.2□□□□□ -1.74
HLA-DQA1Q5Y7H0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms