Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 DDX3P2-201ENST00000446138 111 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 RNU7-23P-201ENST00000459465 62 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC093534.1-201ENST00000504977 132 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC010424.1-201ENST00000506336 297 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 RNU1-143P-201ENST00000516296 146 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 HMGB1P41-201ENST00000520234 440 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 PSMA2P1-201ENST00000526365 646 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC087883.1-201ENST00000551882 391 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 MTCO3P24-201ENST00000572729 782 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC040904.1-201ENST00000590850 223 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC245014.2-201ENST00000603689 287 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AL358072.1-201ENST00000604156 575 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 NUTF2P8-201ENST00000604593 363 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC007363.1-201ENST00000604736 620 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC246785.4-201ENST00000605374 287 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC007619.2-201ENST00000605743 379 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 U1.23-201ENST00000610293 146 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 uc_338.25-201ENST00000613756 156 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 RNU1-68P-201ENST00000615382 146 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC072046.2-201ENST00000618366 268 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 U1.39-201ENST00000621562 146 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 MTND5P7-201ENST00000413558 1798 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AC091564.4-201ENST00000533934 2194 ntBASIC3.32□□□□□ -1.88
SNX30Q5VWJ9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 CR848007.1-201ENST00000442354 1699 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 SMIM11P1-201ENST00000369586 178 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 SAR1AP2-201ENST00000392696 594 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 RNU6-248P-201ENST00000410720 107 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 C1DP2-201ENST00000418167 426 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 AC010153.1-201ENST00000432862 727 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 AL022238.1-201ENST00000442557 355 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 AC244505.5-201ENST00000443639 207 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 RAP1BP2-201ENST00000478270 544 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 RPL39P36-201ENST00000490784 156 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 AC068135.2-201ENST00000569293 1028 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 AC004832.5-201ENST00000608677 401 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 AC093831.2-201ENST00000624393 3427 ntBASIC3.31□□□□□ -1.88
SNX30Q5VWJ9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 RNU1-105P-201ENST00000363470 161 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 RNU6-525P-201ENST00000363685 104 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 CD24P4-201ENST00000382840 243 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 RNU6-190P-201ENST00000384154 102 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 RNU6-297P-201ENST00000384636 107 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 Y_RNA.553-201ENST00000384670 102 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 RNU2-68P-201ENST00000410878 191 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 HMGN2P30-201ENST00000423237 256 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 RPL7P46-201ENST00000425129 740 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 ISCA1P1-201ENST00000426679 387 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 ISCA1P6-201ENST00000427740 390 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AC104850.1-201ENST00000435940 476 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 MTCO2P16-201ENST00000436962 677 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 USP9YP29-201ENST00000445112 563 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AL671855.1-201ENST00000446875 1203 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AC007182.2-201ENST00000489251 402 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 MTND4P2-201ENST00000507767 1203 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AC105313.1-201ENST00000509121 353 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AC022616.3-201ENST00000523940 148 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AC015871.2-201ENST00000603605 948 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 BNIP3P9-201ENST00000603714 553 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AL160281.1-201ENST00000605307 311 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AC004805.2-201ENST00000605382 482 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 AC100793.4-201ENST00000613683 429 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 MTND5P42-201ENST00000637720 498 ntBASIC3.3□□□□□ -1.88
SNX30Q5VWJ9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms