Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AC073073.2-201ENST00000609827 2578 ntBASIC3.7□□□□□ -1.82
RNF220Q5VTB9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 RNU6-270P-201ENST00000364131 105 ntBASIC3.7□□□□□ -1.82
RNF220Q5VTB9 RNU6-328P-201ENST00000390887 106 ntBASIC3.7□□□□□ -1.82
RNF220Q5VTB9 RNA5SP38-201ENST00000410750 119 ntBASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 HSFY6P-201ENST00000445573 403 ntBASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AC139453.3-201ENST00000493276 369 ntBASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AC078814.3-201ENST00000553036 491 ntBASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AC060780.3-201ENST00000589464 80 ntBASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AC103710.3-201ENST00000608157 948 ntBASIC3.7□□□□□ -1.82
RNF220Q5VTB9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AL591424.2-201ENST00000617023 128 ntBASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AC099654.14-201ENST00000638599 341 ntBASIC3.7□□□□□ -1.82
RNF220Q5VTB9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF220Q5VTB9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 CASC19-280ENST00000642102 1351 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 Y_RNA.157-201ENST00000363638 102 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 RNU1-32P-201ENST00000363937 159 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 RNU6-82P-201ENST00000363970 107 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 RNU6-45P-201ENST00000384471 107 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 MIR578-201ENST00000384828 96 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 RNU6-332P-201ENST00000391193 108 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 MIR888-201ENST00000401186 77 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AC016397.1-201ENST00000412463 242 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 RPL23AP82-202ENST00000427528 469 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AL669831.1-202ENST00000428504 417 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AL121601.2-201ENST00000438019 707 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 GTF2IP13-201ENST00000438487 386 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AC105137.1-201ENST00000484355 562 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AC026979.1-201ENST00000492525 396 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 CCDC34P1-201ENST00000507441 517 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AC008716.1-201ENST00000511084 513 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 MIR4284-201ENST00000578924 81 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 MIR4474-201ENST00000579189 78 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 MIR3138-201ENST00000585238 82 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AC073308.1-201ENST00000623696 305 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 MIR7641-1-201ENST00000627518 61 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
RNF220Q5VTB9 AC005183.1-201ENST00000603687 1979 ntBASIC3.69□□□□□ -1.82
RNF220Q5VTB9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 Y_RNA.399-201ENST00000383955 105 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 SNORA16.2-201ENST00000390991 127 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 HLFP1-201ENST00000402375 499 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 SNORA57.3-201ENST00000411095 141 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 RPL30P16-201ENST00000419341 429 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AC099548.1-201ENST00000421443 426 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 MTND4LP11-201ENST00000422184 280 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 ARF4P2-201ENST00000430209 526 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF220Q5VTB9 SETP5-201ENST00000437270 562 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 HMGN2P20-201ENST00000437531 273 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 BRK1P2-201ENST00000442875 223 ntBASIC3.68□□□□□ -1.82
RNF220Q5VTB9 AL360271.2-201ENST00000447710 161 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms