Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AC012507.3-201ENST00000603556 477 ntBASIC3.71□□□□□ -1.82
TTC39AQ5SRH9 Z84480.1-201ENST00000605131 311 ntBASIC3.71□□□□□ -1.82
TTC39AQ5SRH9 AC007038.2-201ENST00000608095 740 ntBASIC3.71□□□□□ -1.82
TTC39AQ5SRH9 AC245517.5-201ENST00000611529 162 ntBASIC3.71□□□□□ -1.82
TTC39AQ5SRH9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.71□□□□□ -1.82
TTC39AQ5SRH9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TTC39AQ5SRH9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
TTC39AQ5SRH9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TTC39AQ5SRH9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TTC39AQ5SRH9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
TTC39AQ5SRH9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
TTC39AQ5SRH9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AL079305.1-201ENST00000623159 3008 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 RNU6-1085P-201ENST00000363576 107 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 RNU5A-8P-201ENST00000364102 114 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 RNU1-140P-201ENST00000365040 165 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 RNU6-805P-201ENST00000365643 106 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 RNU6-483P-201ENST00000384088 108 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 MTCO1P20-201ENST00000425366 358 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 TIMM9P3-201ENST00000428659 274 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AC000111.3-201ENST00000433478 193 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 RPS15AP9-201ENST00000439856 381 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 WASF1P1-201ENST00000447560 1131 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 RN7SL20P-201ENST00000488827 297 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 PRDX4P1-201ENST00000507189 574 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AP000889.1-201ENST00000530968 660 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 H3F3AP1-201ENST00000559984 334 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 COX6CP3-201ENST00000580869 223 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AL451007.1-201ENST00000595491 289 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 KC877982.1-201ENST00000602313 470 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AC008277.2-201ENST00000605196 797 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AC104458.1-201ENST00000608243 463 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AL136313.1-201ENST00000624804 202 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AC019226.1-201ENST00000625666 515 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AC004972.1-201ENST00000623934 2209 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 AL138713.1-201ENST00000624026 2130 ntBASIC3.7□□□□□ -1.82
TTC39AQ5SRH9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AC073325.2-201ENST00000339545 159 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 Y_RNA.88-201ENST00000363029 99 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 RNU6-867P-201ENST00000364956 107 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 Y_RNA.303-201ENST00000364998 94 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 USP9YP27-201ENST00000418455 438 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 TOMM22P1-201ENST00000418578 312 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AC022018.1-201ENST00000430685 241 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 HMGB1P31-201ENST00000437242 427 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 RPL23AP22-201ENST00000437556 453 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AC125238.1-201ENST00000448842 249 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AC140076.1-201ENST00000449897 361 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 RPL31P58-201ENST00000469001 379 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AC010265.1-201ENST00000513509 211 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 RNU1-61P-201ENST00000516107 151 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 SCARNA24.1-201ENST00000516465 137 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 Y_RNA.693-201ENST00000516641 110 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 SCARNA13-201ENST00000516672 275 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 RNA5SP468-201ENST00000516782 93 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 MTND1P35-201ENST00000526739 508 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AC126177.3-201ENST00000551839 688 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AP005205.1-201ENST00000563503 508 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AC025678.1-201ENST00000567861 338 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AL031176.1-201ENST00000604554 466 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AC017083.3-201ENST00000609955 700 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AL390240.1-201ENST00000612950 384 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 uc_338.12-201ENST00000616344 181 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 AC110774.1-201ENST00000623567 2018 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 ZNF807-201ENST00000328088 1707 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 SRP72P2-201ENST00000344851 1979 ntBASIC3.69□□□□□ -1.82
TTC39AQ5SRH9 CR848007.1-201ENST00000442354 1699 ntBASIC3.68□□□□□ -1.82
TTC39AQ5SRH9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms