Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 RNU6-1284P-201ENST00000363701 100 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 Y_RNA.381-201ENST00000365666 102 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 MIR1-2-201ENST00000384961 85 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 RNA5SP252-201ENST00000391131 119 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 GSTA9P-201ENST00000406231 611 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 MIR1290-201ENST00000408735 78 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 RNU2-9P-201ENST00000410194 145 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC114491.1-201ENST00000416095 246 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 MTND3P17-201ENST00000416968 344 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 BX842559.1-201ENST00000419615 532 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 MTCO3P5-201ENST00000433620 714 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 NDUFB4P6-201ENST00000436819 366 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 MTND4P25-201ENST00000441039 533 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 NEFMP1-201ENST00000443423 1006 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 MRPS31P2-201ENST00000451581 518 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 RPS29P12-201ENST00000460178 152 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC084357.1-201ENST00000473404 255 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 RPL21P13-201ENST00000488305 481 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC007182.2-201ENST00000489251 402 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC107401.1-201ENST00000503426 685 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 MTND2P33-201ENST00000506452 1031 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 NRON-201ENST00000517270 370 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC124947.2-202ENST00000552735 133 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC034105.3-201ENST00000565294 442 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 MIR5187-201ENST00000583479 76 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AL451007.1-201ENST00000595491 289 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC068790.2-201ENST00000602601 557 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 RPL12P50-201ENST00000603116 116 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC013553.2-201ENST00000604244 589 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 NUTF2P8-201ENST00000604593 363 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AL121992.2-201ENST00000606262 256 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC090132.2-201ENST00000615881 347 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AC022149.2-201ENST00000621061 203 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 AP003122.5-201ENST00000527668 3766 ntBASIC2.91□□□□□ -1.94
PDLIM3Q53GG5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
PDLIM3Q53GG5 API5P2-201ENST00000397055 1498 ntBASIC2.9□□□□□ -1.94
PDLIM3Q53GG5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
PDLIM3Q53GG5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
PDLIM3Q53GG5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
PDLIM3Q53GG5 CR848007.1-201ENST00000442354 1699 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 RNU1-33P-201ENST00000364249 162 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 RNU6-7-201ENST00000364784 107 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 RNU6-8-201ENST00000365467 107 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 RNU5E-6P-201ENST00000365574 115 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 Y_RNA.409-201ENST00000383990 98 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 RNU6-1215P-201ENST00000384441 102 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AL451054.2-201ENST00000420896 202 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AC245054.1-201ENST00000420944 258 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 RPL31P12-201ENST00000422587 358 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 PIGFP3-201ENST00000441918 722 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 SNORD105B-201ENST00000458770 79 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 SNORD97-201ENST00000459187 142 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AC010401.1-201ENST00000463867 348 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 MTCO2P29-201ENST00000465212 189 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 RN7SL594P-201ENST00000470590 287 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AC010493.1-201ENST00000513479 292 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 FAM92A1P1-201ENST00000528023 890 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AC004024.1-201ENST00000549244 247 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 MIR4672-201ENST00000583126 81 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 HSPE1P7-201ENST00000604681 321 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 AL158032.1-201ENST00000605401 106 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 FRG1KP-201ENST00000623592 341 ntBASIC2.9□□□□□ -1.95
PDLIM3Q53GG5 MIR6863-201ENST00000636112 90 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms