Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 Y_RNA.159-201ENST00000363674 87 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 RNU6-169P-201ENST00000365336 107 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 Y_RNA.535-201ENST00000384612 99 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 SNORA11.2-201ENST00000408318 127 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 SNRPEP10-201ENST00000420249 274 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AL353193.1-201ENST00000421444 268 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC016696.1-201ENST00000446949 318 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 SNRPGP6-201ENST00000451124 220 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 PMCHL2-203ENST00000457791 237 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 VN1R17P-201ENST00000472048 1090 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 HSPE1P6-201ENST00000479457 291 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 RNU6-1281P-201ENST00000516223 105 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 RN7SKP209-201ENST00000516888 304 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 HMGB1P41-201ENST00000520234 440 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 CENPUP1-201ENST00000526649 1202 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 ARL2BPP2-201ENST00000550907 489 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 SUB1P2-201ENST00000556401 297 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 RPL23AP84-201ENST00000571193 464 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 MIR3690-201ENST00000580266 75 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 MIR4293-201ENST00000584305 78 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC093788.1-201ENST00000609356 927 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 AC010338.1-201ENST00000621823 717 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 FER-210ENST00000628534 558 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 GABPAP-201ENST00000419271 1356 ntBASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM71Q2Q1W2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 BDP1P-201ENST00000582658 1990 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 RNU2-36P-201ENST00000410361 191 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC018630.2-202ENST00000422992 927 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 Z75741.1-201ENST00000446793 314 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC022364.2-201ENST00000457963 554 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 SNORD97-201ENST00000459187 142 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 RPL21P104-201ENST00000464143 478 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC079382.1-201ENST00000493346 557 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 MTCO2P30-201ENST00000503662 364 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AL359273.1-201ENST00000510918 627 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AL355836.1-201ENST00000555951 870 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC098848.2-201ENST00000588023 330 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AL162413.1-201ENST00000603198 110 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC007621.1-201ENST00000604544 437 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC106900.2-201ENST00000604994 317 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC099778.2-201ENST00000610904 211 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC048347.1-201ENST00000624621 427 ntBASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM71Q2Q1W2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM71Q2Q1W2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM71Q2Q1W2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM71Q2Q1W2 RNU6-1284P-201ENST00000363701 100 ntBASIC3.83□□□□□ -1.8
TRIM71Q2Q1W2 RNU6-1322P-201ENST00000364309 107 ntBASIC3.83□□□□□ -1.8
TRIM71Q2Q1W2 RNU6-39P-201ENST00000384344 107 ntBASIC3.83□□□□□ -1.8
TRIM71Q2Q1W2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRIM71Q2Q1W2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM71Q2Q1W2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM71Q2Q1W2 GPR143P-201ENST00000434155 205 ntBASIC3.83□□□□□ -1.8
TRIM71Q2Q1W2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.83□□□□□ -1.8
TRIM71Q2Q1W2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM71Q2Q1W2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.83□□□□□ -1.8
TRIM71Q2Q1W2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms