Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.83□□□□□ -2.12
SSX1Q16384 AC010376.1-201ENST00000522101 334 ntBASIC1.83□□□□□ -2.12
SSX1Q16384 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SSX1Q16384 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.83□□□□□ -2.12
SSX1Q16384 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.83□□□□□ -2.12
SSX1Q16384 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.83□□□□□ -2.12
SSX1Q16384 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.83□□□□□ -2.12
SSX1Q16384 AL033523.1-201ENST00000605153 153 ntBASIC1.83□□□□□ -2.12
SSX1Q16384 SNORD14A-201ENST00000606526 91 ntBASIC1.83□□□□□ -2.12
SSX1Q16384 AC106858.1-201ENST00000637497 429 ntBASIC1.83□□□□□ -2.12
SSX1Q16384 AL359851.1-201ENST00000569460 4997 ntBASIC1.83□□□□□ -2.12
SSX1Q16384 AL109809.4-201ENST00000603520 2185 ntBASIC1.83□□□□□ -2.12
SSX1Q16384 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SSX1Q16384 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
SSX1Q16384 AC110491.1-201ENST00000562191 2010 ntBASIC1.83□□□□□ -2.12
SSX1Q16384 RNU6-778P-201ENST00000363269 103 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 SNORA38-201ENST00000363946 132 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 RNU6-413P-201ENST00000384115 107 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 RNU6-1000P-201ENST00000391066 106 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 NDUFS5P4-201ENST00000412983 318 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.82□□□□□ -2.12
SSX1Q16384 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.82□□□□□ -2.12
SSX1Q16384 AC010153.1-201ENST00000432862 727 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 AC098831.1-201ENST00000440661 216 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 AC007327.1-201ENST00000447461 264 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 TPT1P14-201ENST00000448018 505 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 AC104982.1-201ENST00000478775 574 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 AC021146.8-201ENST00000507455 733 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 AC110760.3-202ENST00000515177 371 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.82□□□□□ -2.12
SSX1Q16384 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.82□□□□□ -2.12
SSX1Q16384 RNU4-29P-201ENST00000515943 174 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 RNU6-927P-201ENST00000516199 100 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 SNORA31.6-201ENST00000516241 130 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.82□□□□□ -2.12
SSX1Q16384 AC091163.3-201ENST00000518269 1144 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.82□□□□□ -2.12
SSX1Q16384 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.82□□□□□ -2.12
SSX1Q16384 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.82□□□□□ -2.12
SSX1Q16384 AP001646.1-201ENST00000527936 915 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 EIF4BP1-201ENST00000554881 351 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 ANP32BP3-201ENST00000559213 706 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
SSX1Q16384 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.82□□□□□ -2.12
SSX1Q16384 BNIP3P27-201ENST00000599991 412 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 AC026790.2-201ENST00000606282 430 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 AC131235.4-201ENST00000609288 620 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 PART1_2.1-201ENST00000612397 250 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 AC005332.10-201ENST00000612725 619 ntBASIC1.82□□□□□ -2.12
SSX1Q16384 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SSX1Q16384 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SSX1Q16384 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.81□□□□□ -2.12
SSX1Q16384 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
SSX1Q16384 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SSX1Q16384 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
SSX1Q16384 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SSX1Q16384 Y_RNA.245-201ENST00000364493 95 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 RNU1-73P-201ENST00000383971 164 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 RNU6-1083P-201ENST00000384022 107 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.81□□□□□ -2.12
SSX1Q16384 USP9YP26-201ENST00000421008 661 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AL109913.1-201ENST00000421173 514 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 MICF-203ENST00000432679 129 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 MTND1P28-201ENST00000435623 950 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.81□□□□□ -2.12
SSX1Q16384 MTATP6P30-201ENST00000443540 664 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.81□□□□□ -2.12
SSX1Q16384 AC020550.1-201ENST00000447385 163 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.81□□□□□ -2.12
SSX1Q16384 CECR9-201ENST00000453421 199 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.81□□□□□ -2.12
SSX1Q16384 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.81□□□□□ -2.12
SSX1Q16384 AC013267.1-201ENST00000458227 267 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AC008481.1-201ENST00000463278 396 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 TRBV1-201ENST00000476502 284 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AC022493.1-201ENST00000492984 337 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AC023141.11-201ENST00000508864 202 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 LTV1P1-201ENST00000510683 1237 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 MTND5P13-201ENST00000513046 1079 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 RNA5SP281-201ENST00000516504 135 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 MTCO2P15-201ENST00000532655 656 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AL049838.1-201ENST00000563647 981 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AC060771.1-201ENST00000582031 164 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.81□□□□□ -2.12
SSX1Q16384 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.81□□□□□ -2.12
SSX1Q16384 AC008121.1-201ENST00000603244 268 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.81□□□□□ -2.12
SSX1Q16384 AL121652.1-201ENST00000608851 448 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AC025594.3-201ENST00000613068 790 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.81□□□□□ -2.12
SSX1Q16384 AC116618.1-201ENST00000634617 774 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.81□□□□□ -2.12
SSX1Q16384 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
SSX1Q16384 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SSX1Q16384 SNORA5B-201ENST00000363786 132 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 Y_RNA.333-201ENST00000365274 102 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 ERHP2-201ENST00000402323 299 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 AL139397.2-201ENST00000404529 772 ntBASIC1.8□□□□□ -2.12
SSX1Q16384 SNORD23.1-201ENST00000408212 104 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms