Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC004792.1-201ENST00000614523 137 ntBASIC4.74□□□□□ -1.65
SOX4Q06945 AP001282.2-201ENST00000616149 309 ntBASIC4.74□□□□□ -1.65
SOX4Q06945 uc_338.13-201ENST00000618243 179 ntBASIC4.74□□□□□ -1.65
SOX4Q06945 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX4Q06945 AL691447.3-201ENST00000635020 330 ntBASIC4.74□□□□□ -1.65
SOX4Q06945 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.74□□□□□ -1.65
SOX4Q06945 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SOX4Q06945 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX4Q06945 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX4Q06945 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX4Q06945 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX4Q06945 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX4Q06945 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX4Q06945 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX4Q06945 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.74□□□□□ -1.65
SOX4Q06945 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SOX4Q06945 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SOX4Q06945 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SOX4Q06945 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SOX4Q06945 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.73□□□□□ -1.65
SOX4Q06945 Y_RNA.84-201ENST00000363011 104 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 Y_RNA.270-201ENST00000364693 104 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.73□□□□□ -1.65
SOX4Q06945 SNORA69.1-201ENST00000390904 137 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 MIR921-201ENST00000401133 56 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 MIR1250-201ENST00000408098 113 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 RNU6-1203P-201ENST00000410703 110 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 RNU4-78P-201ENST00000410940 126 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 RPS20P14-201ENST00000412545 360 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 RPL23AP26-201ENST00000412728 464 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.73□□□□□ -1.65
SOX4Q06945 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.73□□□□□ -1.65
SOX4Q06945 AC092017.2-201ENST00000427600 362 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 MYL8P-204ENST00000431574 518 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 RPS26P2-201ENST00000440331 348 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 AC104332.1-201ENST00000440471 797 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 RPEP5-201ENST00000441137 268 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.73□□□□□ -1.65
SOX4Q06945 AC012158.1-204ENST00000483430 465 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 RNA5SP497-201ENST00000516081 97 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.73□□□□□ -1.65
SOX4Q06945 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.73□□□□□ -1.65
SOX4Q06945 AMZ2P1-203ENST00000565833 850 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 CPDP1-201ENST00000579660 283 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 RN7SL435P-201ENST00000584418 282 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 AL160290.3-201ENST00000604869 165 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 AC091979.2-201ENST00000607514 214 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.73□□□□□ -1.65
SOX4Q06945 MIR4275-201ENST00000636486 87 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX4Q06945 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SOX4Q06945 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
SOX4Q06945 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SOX4Q06945 AL031595.2-201ENST00000624215 19071 ntBASIC4.73□□□□□ -1.65
SOX4Q06945 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SOX4Q06945 AC026951.1-201ENST00000559530 2459 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX4Q06945 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SOX4Q06945 Y_RNA.324-201ENST00000365165 102 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 U8.8-201ENST00000365399 135 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 RNA5SP366-201ENST00000365454 123 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 RNU6-746P-201ENST00000384112 109 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 AL591034.2-201ENST00000402839 359 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 SNORA11F-201ENST00000408237 128 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 RNU2-43P-201ENST00000410306 190 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 RNU2-33P-201ENST00000410344 192 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 RN7SKP167-201ENST00000411047 285 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 RNU6-130P-201ENST00000411112 103 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 AC063979.1-201ENST00000415539 377 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 AC007098.1-201ENST00000420122 367 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 EIF4EP2-201ENST00000422816 654 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 AC004975.1-201ENST00000428733 208 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.72□□□□□ -1.65
SOX4Q06945 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SOX4Q06945 NUTF2P3-201ENST00000448540 384 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 RPL37P6-202ENST00000464216 403 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 RPL23AP2-201ENST00000471227 466 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 RN7SL691P-201ENST00000494487 301 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 AC026784.1-201ENST00000507986 352 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 RNU6-840P-201ENST00000517275 65 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.72□□□□□ -1.65
SOX4Q06945 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.72□□□□□ -1.65
SOX4Q06945 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.72□□□□□ -1.65
SOX4Q06945 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SOX4Q06945 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SOX4Q06945 AC091905.2-201ENST00000623143 306 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 AC091903.1-201ENST00000624322 454 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX4Q06945 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX4Q06945 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.72□□□□□ -1.65
SOX4Q06945 PRO1804-201ENST00000623780 2050 ntBASIC4.72□□□□□ -1.65
SOX4Q06945 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX4Q06945 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX4Q06945 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
SOX4Q06945 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX4Q06945 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SOX4Q06945 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SOX4Q06945 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SOX4Q06945 PHKBP1-201ENST00000450951 1951 ntBASIC4.71□□□□□ -1.66
SOX4Q06945 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms