Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.32□□□□□ -1.88
LTBQ06643 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.32□□□□□ -1.88
LTBQ06643 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LTBQ06643 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LTBQ06643 AC233263.6-201ENST00000631132 1963 ntBASIC3.32□□□□□ -1.88
LTBQ06643 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LTBQ06643 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LTBQ06643 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LTBQ06643 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.32□□□□□ -1.88
LTBQ06643 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LTBQ06643 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LTBQ06643 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LTBQ06643 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LTBQ06643 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.31□□□□□ -1.88
LTBQ06643 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.31□□□□□ -1.88
LTBQ06643 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LTBQ06643 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LTBQ06643 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.31□□□□□ -1.88
LTBQ06643 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LTBQ06643 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
LTBQ06643 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LTBQ06643 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LTBQ06643 Y_RNA.231-201ENST00000364358 102 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RNU6-283P-201ENST00000364788 107 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RNU6-641P-201ENST00000384006 107 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RNU6-38P-201ENST00000384085 107 ntBASIC3.31□□□□□ -1.88
LTBQ06643 Y_RNA.493-201ENST00000384422 102 ntBASIC3.31□□□□□ -1.88
LTBQ06643 SNORD3H-201ENST00000384486 214 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RNU6-831P-201ENST00000384548 107 ntBASIC3.31□□□□□ -1.88
LTBQ06643 SNORD37.1-201ENST00000390968 65 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RNU6-903P-201ENST00000391270 109 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RNU6-193P-201ENST00000410977 107 ntBASIC3.31□□□□□ -1.88
LTBQ06643 BX323014.1-201ENST00000412876 237 ntBASIC3.31□□□□□ -1.88
LTBQ06643 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.31□□□□□ -1.88
LTBQ06643 AC092447.6-201ENST00000414578 210 ntBASIC3.31□□□□□ -1.88
LTBQ06643 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.31□□□□□ -1.88
LTBQ06643 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.31□□□□□ -1.88
LTBQ06643 AC016696.1-201ENST00000446949 318 ntBASIC3.31□□□□□ -1.88
LTBQ06643 HMGN2P21-201ENST00000447764 270 ntBASIC3.31□□□□□ -1.88
LTBQ06643 AL118520.1-201ENST00000450770 291 ntBASIC3.31□□□□□ -1.88
LTBQ06643 MTND1P9-201ENST00000453775 944 ntBASIC3.31□□□□□ -1.88
LTBQ06643 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.31□□□□□ -1.88
LTBQ06643 HMGB3P30-201ENST00000457863 606 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RNU6-333P-201ENST00000459117 107 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RNU6-329P-201ENST00000459618 107 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RN7SL601P-201ENST00000471221 293 ntBASIC3.31□□□□□ -1.88
LTBQ06643 AC078817.1-201ENST00000492623 435 ntBASIC3.31□□□□□ -1.88
LTBQ06643 UBE2CP3-201ENST00000502715 450 ntBASIC3.31□□□□□ -1.88
LTBQ06643 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.31□□□□□ -1.88
LTBQ06643 AC117522.3-201ENST00000507974 584 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RNU4-29P-201ENST00000515943 174 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RNU2-10P-201ENST00000516375 211 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RNU7-51P-201ENST00000516560 62 ntBASIC3.31□□□□□ -1.88
LTBQ06643 FAM60DP-201ENST00000524174 632 ntBASIC3.31□□□□□ -1.88
LTBQ06643 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.31□□□□□ -1.88
LTBQ06643 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.31□□□□□ -1.88
LTBQ06643 BNIP3P6-201ENST00000549284 499 ntBASIC3.31□□□□□ -1.88
LTBQ06643 MIR5187-201ENST00000583479 76 ntBASIC3.31□□□□□ -1.88
LTBQ06643 MIR4293-201ENST00000584305 78 ntBASIC3.31□□□□□ -1.88
LTBQ06643 AC005498.1-201ENST00000592125 465 ntBASIC3.31□□□□□ -1.88
LTBQ06643 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.31□□□□□ -1.88
LTBQ06643 uc_338.5-201ENST00000611839 155 ntBASIC3.31□□□□□ -1.88
LTBQ06643 AL713922.2-201ENST00000619384 716 ntBASIC3.31□□□□□ -1.88
LTBQ06643 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.31□□□□□ -1.88
LTBQ06643 AL160413.1-201ENST00000622780 310 ntBASIC3.31□□□□□ -1.88
LTBQ06643 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.31□□□□□ -1.88
LTBQ06643 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.31□□□□□ -1.88
LTBQ06643 MFSD8-236ENST00000641509 4050 ntBASIC3.31□□□□□ -1.88
LTBQ06643 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
LTBQ06643 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
LTBQ06643 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LTBQ06643 AC008725.1-201ENST00000605123 2263 ntBASIC3.3□□□□□ -1.88
LTBQ06643 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LTBQ06643 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LTBQ06643 RNU6-552P-201ENST00000362869 119 ntBASIC3.3□□□□□ -1.88
LTBQ06643 RNU6-1227P-201ENST00000383981 107 ntBASIC3.3□□□□□ -1.88
LTBQ06643 Y_RNA.474-201ENST00000384341 102 ntBASIC3.3□□□□□ -1.88
LTBQ06643 UBE2V1P2-201ENST00000397758 440 ntBASIC3.3□□□□□ -1.88
LTBQ06643 MTHFD2P2-201ENST00000407725 247 ntBASIC3.3□□□□□ -1.88
LTBQ06643 RNU2-39P-201ENST00000410604 198 ntBASIC3.3□□□□□ -1.88
LTBQ06643 RN7SKP284-201ENST00000411002 343 ntBASIC3.3□□□□□ -1.88
LTBQ06643 RNA5SP107-201ENST00000411358 122 ntBASIC3.3□□□□□ -1.88
LTBQ06643 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.3□□□□□ -1.88
LTBQ06643 AC114491.1-201ENST00000416095 246 ntBASIC3.3□□□□□ -1.88
LTBQ06643 AC009161.1-201ENST00000417306 376 ntBASIC3.3□□□□□ -1.88
LTBQ06643 ERLEC1P1-201ENST00000433806 578 ntBASIC3.3□□□□□ -1.88
LTBQ06643 AC115115.1-201ENST00000449927 248 ntBASIC3.3□□□□□ -1.88
LTBQ06643 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.3□□□□□ -1.88
LTBQ06643 RNU7-182P-201ENST00000459009 62 ntBASIC3.3□□□□□ -1.88
LTBQ06643 AC007547.1-201ENST00000462177 490 ntBASIC3.3□□□□□ -1.88
LTBQ06643 RPL21P99-201ENST00000480369 423 ntBASIC3.3□□□□□ -1.88
LTBQ06643 RPL7P23-201ENST00000493874 747 ntBASIC3.3□□□□□ -1.88
LTBQ06643 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.3□□□□□ -1.88
LTBQ06643 RN7SKP18-201ENST00000516005 275 ntBASIC3.3□□□□□ -1.88
LTBQ06643 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.3□□□□□ -1.88
LTBQ06643 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.3□□□□□ -1.88
LTBQ06643 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.3□□□□□ -1.88
LTBQ06643 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.3□□□□□ -1.88
LTBQ06643 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.3□□□□□ -1.88
LTBQ06643 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms