Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.54□□□□□ -2
IRX3P78415 SNORA19.3-201ENST00000516165 130 ntBASIC2.54□□□□□ -2
IRX3P78415 HMGN1P28-201ENST00000521340 364 ntBASIC2.54□□□□□ -2
IRX3P78415 DEFB131D-201ENST00000526803 184 ntBASIC2.54□□□□□ -2
IRX3P78415 AL512347.1-201ENST00000566420 503 ntBASIC2.54□□□□□ -2
IRX3P78415 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
IRX3P78415 AC009977.1-201ENST00000586015 570 ntBASIC2.54□□□□□ -2
IRX3P78415 AL109620.1-201ENST00000618738 1197 ntBASIC2.54□□□□□ -2
IRX3P78415 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
IRX3P78415 AL353997.5-201ENST00000618886 171 ntBASIC2.54□□□□□ -2
IRX3P78415 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.54□□□□□ -2
IRX3P78415 MTND5P29-201ENST00000458676 1807 ntBASIC2.54□□□□□ -2
IRX3P78415 AL354685.2-201ENST00000448218 1447 ntBASIC2.53□□□□□ -2
IRX3P78415 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
IRX3P78415 AL356292.1-201ENST00000283110 373 ntBASIC2.53□□□□□ -2
IRX3P78415 RNA5SP37-201ENST00000365420 130 ntBASIC2.53□□□□□ -2
IRX3P78415 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.53□□□□□ -2
IRX3P78415 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.53□□□□□ -2
IRX3P78415 AL449283.1-202ENST00000418249 604 ntBASIC2.53□□□□□ -2
IRX3P78415 RPS3AP37-201ENST00000419176 745 ntBASIC2.53□□□□□ -2
IRX3P78415 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.53□□□□□ -2
IRX3P78415 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.53□□□□□ -2
IRX3P78415 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.53□□□□□ -2
IRX3P78415 MTATP6P14-201ENST00000455189 673 ntBASIC2.53□□□□□ -2
IRX3P78415 RNU6-420P-201ENST00000458780 107 ntBASIC2.53□□□□□ -2
IRX3P78415 RNU7-136P-201ENST00000458819 69 ntBASIC2.53□□□□□ -2
IRX3P78415 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.53□□□□□ -2
IRX3P78415 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.53□□□□□ -2
IRX3P78415 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.53□□□□□ -2
IRX3P78415 RNU6-991P-201ENST00000516168 107 ntBASIC2.53□□□□□ -2
IRX3P78415 RNA5SP200-201ENST00000516360 103 ntBASIC2.53□□□□□ -2
IRX3P78415 RNU6-1282P-201ENST00000516735 96 ntBASIC2.53□□□□□ -2
IRX3P78415 RNU6-528P-201ENST00000516926 100 ntBASIC2.53□□□□□ -2
IRX3P78415 AC021451.1-201ENST00000523498 1129 ntBASIC2.53□□□□□ -2
IRX3P78415 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.53□□□□□ -2
IRX3P78415 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
IRX3P78415 AC090888.1-201ENST00000561335 1141 ntBASIC2.53□□□□□ -2
IRX3P78415 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.53□□□□□ -2
IRX3P78415 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.53□□□□□ -2
IRX3P78415 AL096840.1-201ENST00000603287 93 ntBASIC2.53□□□□□ -2
IRX3P78415 AC010378.1-201ENST00000619270 362 ntBASIC2.53□□□□□ -2
IRX3P78415 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.53□□□□□ -2
IRX3P78415 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
IRX3P78415 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.52□□□□□ -2.01
IRX3P78415 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
IRX3P78415 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
IRX3P78415 RNU4-92P-201ENST00000363783 136 ntBASIC2.52□□□□□ -2.01
IRX3P78415 RNU1-51P-201ENST00000365345 176 ntBASIC2.52□□□□□ -2.01
IRX3P78415 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.52□□□□□ -2.01
IRX3P78415 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.52□□□□□ -2.01
IRX3P78415 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.52□□□□□ -2.01
IRX3P78415 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.52□□□□□ -2.01
IRX3P78415 AC090774.1-201ENST00000435925 246 ntBASIC2.52□□□□□ -2.01
IRX3P78415 HMGB1P18-201ENST00000438801 619 ntBASIC2.52□□□□□ -2.01
IRX3P78415 RPL23AP76-201ENST00000441860 458 ntBASIC2.52□□□□□ -2.01
IRX3P78415 MTND1P16-201ENST00000465177 898 ntBASIC2.52□□□□□ -2.01
IRX3P78415 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.52□□□□□ -2.01
IRX3P78415 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.52□□□□□ -2.01
IRX3P78415 RPL38P4-201ENST00000502376 214 ntBASIC2.52□□□□□ -2.01
IRX3P78415 MTCYBP17-201ENST00000503579 789 ntBASIC2.52□□□□□ -2.01
IRX3P78415 AC008837.2-201ENST00000513076 418 ntBASIC2.52□□□□□ -2.01
IRX3P78415 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.52□□□□□ -2.01
IRX3P78415 SCARNA16.3-201ENST00000516595 184 ntBASIC2.52□□□□□ -2.01
IRX3P78415 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.52□□□□□ -2.01
IRX3P78415 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.52□□□□□ -2.01
IRX3P78415 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.52□□□□□ -2.01
IRX3P78415 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.52□□□□□ -2.01
IRX3P78415 MIR4509-3-201ENST00000578671 94 ntBASIC2.52□□□□□ -2.01
IRX3P78415 AC022662.1-201ENST00000580252 331 ntBASIC2.52□□□□□ -2.01
IRX3P78415 MIR4509-2-201ENST00000583920 94 ntBASIC2.52□□□□□ -2.01
IRX3P78415 OR10AB1P-201ENST00000609613 938 ntBASIC2.52□□□□□ -2.01
IRX3P78415 AL590099.1-201ENST00000615276 138 ntBASIC2.52□□□□□ -2.01
IRX3P78415 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.52□□□□□ -2.01
IRX3P78415 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.52□□□□□ -2.01
IRX3P78415 MIR4509-1-201ENST00000618224 94 ntBASIC2.52□□□□□ -2.01
IRX3P78415 AL158163.2-201ENST00000619110 700 ntBASIC2.52□□□□□ -2.01
IRX3P78415 AC022306.3-201ENST00000619930 550 ntBASIC2.52□□□□□ -2.01
IRX3P78415 AC009268.2-201ENST00000621925 457 ntBASIC2.52□□□□□ -2.01
IRX3P78415 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.52□□□□□ -2.01
IRX3P78415 AC011477.1-204ENST00000623416 1325 ntBASIC2.51□□□□□ -2.01
IRX3P78415 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
IRX3P78415 RNU5A-1-201ENST00000362698 116 ntBASIC2.51□□□□□ -2.01
IRX3P78415 Y_RNA.472-201ENST00000384322 102 ntBASIC2.51□□□□□ -2.01
IRX3P78415 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.51□□□□□ -2.01
IRX3P78415 MIR1284-201ENST00000408337 120 ntBASIC2.51□□□□□ -2.01
IRX3P78415 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.51□□□□□ -2.01
IRX3P78415 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.51□□□□□ -2.01
IRX3P78415 NANOGP2-201ENST00000435391 727 ntBASIC2.51□□□□□ -2.01
IRX3P78415 AL603825.1-201ENST00000438481 80 ntBASIC2.51□□□□□ -2.01
IRX3P78415 RPL26P6-201ENST00000440913 438 ntBASIC2.51□□□□□ -2.01
IRX3P78415 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.51□□□□□ -2.01
IRX3P78415 AC009237.8-201ENST00000445492 379 ntBASIC2.51□□□□□ -2.01
IRX3P78415 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.51□□□□□ -2.01
IRX3P78415 ZNF886P-201ENST00000450781 723 ntBASIC2.51□□□□□ -2.01
IRX3P78415 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.51□□□□□ -2.01
IRX3P78415 AC072039.1-201ENST00000477611 581 ntBASIC2.51□□□□□ -2.01
IRX3P78415 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.51□□□□□ -2.01
IRX3P78415 SCARNA15.2-201ENST00000516409 127 ntBASIC2.51□□□□□ -2.01
IRX3P78415 RNA5SP364-201ENST00000516938 78 ntBASIC2.51□□□□□ -2.01
IRX3P78415 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms