Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 MIR4284-201ENST00000578924 81 ntBASIC0.97□□□□□ -2.25
RPS28P62857 MIR5089-201ENST00000580047 84 ntBASIC0.97□□□□□ -2.25
RPS28P62857 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.97□□□□□ -2.25
RPS28P62857 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC0.97□□□□□ -2.25
RPS28P62857 NDUFA8P1-201ENST00000605525 367 ntBASIC0.97□□□□□ -2.25
RPS28P62857 AC091946.2-201ENST00000606105 291 ntBASIC0.97□□□□□ -2.25
RPS28P62857 MIR7155-201ENST00000615925 56 ntBASIC0.97□□□□□ -2.25
RPS28P62857 AC009159.1-201ENST00000618386 642 ntBASIC0.97□□□□□ -2.25
RPS28P62857 MIR6075-201ENST00000620782 95 ntBASIC0.97□□□□□ -2.25
RPS28P62857 AC090517.3-201ENST00000625170 141 ntBASIC0.97□□□□□ -2.25
RPS28P62857 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC0.97□□□□□ -2.25
RPS28P62857 AC009093.8-201ENST00000641769 292 ntBASIC0.97□□□□□ -2.25
RPS28P62857 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
RPS28P62857 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
RPS28P62857 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.96□□□□□ -2.25
RPS28P62857 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
RPS28P62857 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
RPS28P62857 RNA5SP267-201ENST00000364893 126 ntBASIC0.96□□□□□ -2.26
RPS28P62857 RNU6-1032P-201ENST00000384100 107 ntBASIC0.96□□□□□ -2.26
RPS28P62857 SNORD14D-201ENST00000384390 87 ntBASIC0.96□□□□□ -2.26
RPS28P62857 MIR320A-201ENST00000385302 82 ntBASIC0.96□□□□□ -2.26
RPS28P62857 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.96□□□□□ -2.26
RPS28P62857 AL358453.1-201ENST00000422522 250 ntBASIC0.96□□□□□ -2.26
RPS28P62857 AC010153.1-201ENST00000432862 727 ntBASIC0.96□□□□□ -2.26
RPS28P62857 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.96□□□□□ -2.26
RPS28P62857 AL121601.2-201ENST00000438019 707 ntBASIC0.96□□□□□ -2.26
RPS28P62857 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
RPS28P62857 AC092902.1-201ENST00000486999 259 ntBASIC0.96□□□□□ -2.26
RPS28P62857 AC108729.1-201ENST00000487812 947 ntBASIC0.96□□□□□ -2.26
RPS28P62857 AC139453.3-201ENST00000493276 369 ntBASIC0.96□□□□□ -2.26
RPS28P62857 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.96□□□□□ -2.26
RPS28P62857 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
RPS28P62857 AC009812.2-201ENST00000517657 457 ntBASIC0.96□□□□□ -2.26
RPS28P62857 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.96□□□□□ -2.26
RPS28P62857 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC0.96□□□□□ -2.26
RPS28P62857 AC025884.1-201ENST00000556034 378 ntBASIC0.96□□□□□ -2.26
RPS28P62857 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC0.96□□□□□ -2.26
RPS28P62857 AC044860.2-201ENST00000561005 179 ntBASIC0.96□□□□□ -2.26
RPS28P62857 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.96□□□□□ -2.26
RPS28P62857 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.96□□□□□ -2.26
RPS28P62857 AL118556.2-201ENST00000614375 824 ntBASIC0.96□□□□□ -2.26
RPS28P62857 AC002550.2-201ENST00000621246 394 ntBASIC0.96□□□□□ -2.26
RPS28P62857 TEX21P-201ENST00000447107 1476 ntBASIC0.96□□□□□ -2.26
RPS28P62857 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
RPS28P62857 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RPS28P62857 RNU6-492P-201ENST00000363035 104 ntBASIC0.95□□□□□ -2.26
RPS28P62857 RNA5SP283-201ENST00000365604 119 ntBASIC0.95□□□□□ -2.26
RPS28P62857 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RPS28P62857 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS28P62857 RNU6-637P-201ENST00000384050 107 ntBASIC0.95□□□□□ -2.26
RPS28P62857 RNU1-78P-201ENST00000391248 165 ntBASIC0.95□□□□□ -2.26
RPS28P62857 TPMTP3-201ENST00000411928 735 ntBASIC0.95□□□□□ -2.26
RPS28P62857 RPL37P10-201ENST00000412884 288 ntBASIC0.95□□□□□ -2.26
RPS28P62857 EIF1AXP1-201ENST00000419267 435 ntBASIC0.95□□□□□ -2.26
RPS28P62857 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS28P62857 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS28P62857 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC0.95□□□□□ -2.26
RPS28P62857 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
RPS28P62857 FCF1P1-201ENST00000432690 571 ntBASIC0.95□□□□□ -2.26
RPS28P62857 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS28P62857 RPS15AP9-201ENST00000439856 381 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AC017099.1-201ENST00000448261 1028 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AC126389.1-201ENST00000477436 290 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AC023790.1-201ENST00000482174 347 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AC007182.2-201ENST00000489251 402 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.95□□□□□ -2.26
RPS28P62857 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS28P62857 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.95□□□□□ -2.26
RPS28P62857 AC109927.2-201ENST00000506416 303 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC0.95□□□□□ -2.26
RPS28P62857 AC025465.3-201ENST00000510570 311 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AC096725.1-201ENST00000514266 313 ntBASIC0.95□□□□□ -2.26
RPS28P62857 RNU6-581P-201ENST00000516214 105 ntBASIC0.95□□□□□ -2.26
RPS28P62857 RNU7-40P-201ENST00000516397 64 ntBASIC0.95□□□□□ -2.26
RPS28P62857 RNU6-902P-201ENST00000517212 91 ntBASIC0.95□□□□□ -2.26
RPS28P62857 MTCYBP20-201ENST00000524239 1129 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AP000916.1-201ENST00000533869 835 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC0.95□□□□□ -2.26
RPS28P62857 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS28P62857 AC002400.1-201ENST00000569310 726 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS28P62857 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS28P62857 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS28P62857 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.95□□□□□ -2.26
RPS28P62857 AC103810.6-201ENST00000606708 136 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AL022345.1-201ENST00000607292 135 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AP001521.1-201ENST00000609150 300 ntBASIC0.95□□□□□ -2.26
RPS28P62857 MIR6716-201ENST00000613413 80 ntBASIC0.95□□□□□ -2.26
RPS28P62857 AL121890.5-201ENST00000620848 304 ntBASIC0.95□□□□□ -2.26
RPS28P62857 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC0.95□□□□□ -2.26
RPS28P62857 ANKRD36BP1-201ENST00000358576 1779 ntBASIC0.95□□□□□ -2.26
RPS28P62857 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RPS28P62857 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.94□□□□□ -2.26
RPS28P62857 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.94□□□□□ -2.26
RPS28P62857 SNORD56.4-201ENST00000363883 71 ntBASIC0.94□□□□□ -2.26
RPS28P62857 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC0.94□□□□□ -2.26
RPS28P62857 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC0.94□□□□□ -2.26
RPS28P62857 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC0.94□□□□□ -2.26
RPS28P62857 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC0.94□□□□□ -2.26
RPS28P62857 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms